RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 NUP133Q8WUM0 1156 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 ZCCHC17Q9NP64 241 aaKnown RBP19.72■□□□□ 0.75
VAC14-210ENST00000568548 A0A0U1RQJ8 604 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 TERF2Q15554 542 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 APOA5Q6Q788 366 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 ATRIPQ8WXE1 791 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 GOLGA8AA7E2F4 631 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 EXOC5O00471 708 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 IARSP41252 1262 aaKnown RBP19.72■□□□□ 0.75
VAC14-210ENST00000568548 STX17P56962 302 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 MIGA1Q8NAN2 632 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 STAMQ92783 540 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 TBC1D2BQ9UPU7 963 aa19.72■□□□□ 0.75
VAC14-210ENST00000568548 NRDCO43847 1150 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 TOP1P11387 765 aaKnown RBP19.71■□□□□ 0.75
VAC14-210ENST00000568548 ARMT1Q9H993 441 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 KCNH3Q9ULD8 1083 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.71■□□□□ 0.75
VAC14-210ENST00000568548 TACC3Q9Y6A5 838 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 AHDC1Q5TGY3 1603 aaPredicted RBP19.71■□□□□ 0.75
VAC14-210ENST00000568548 DISP2A7MBM2 1401 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 IFIT3O14879 490 aaKnown RBP19.71■□□□□ 0.75
VAC14-210ENST00000568548 POLR2DO15514 142 aaKnown RBP19.71■□□□□ 0.75
VAC14-210ENST00000568548 MTF1Q14872 753 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 ATL3Q6DD88 541 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 BRAPQ7Z569 592 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 UBXN4Q92575 508 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 LAMA4Q16363 1823 aa19.71■□□□□ 0.75
VAC14-210ENST00000568548 ZBTB43O43298 467 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 TFRCP02786 760 aaKnown RBP19.7■□□□□ 0.74
VAC14-210ENST00000568548 FMR1Q06787 632 aaKnown RBP eCLIP19.7■□□□□ 0.74
VAC14-210ENST00000568548 TCIRG1Q13488 830 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 WDR24Q96S15 920 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 SEC31BQ9NQW1 1179 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 INTS13Q9NVM9 706 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 ZSWIM5Q9P217 1185 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 CCDC34Q96HJ3 373 aa19.7■□□□□ 0.74
VAC14-210ENST00000568548 COL16A1Q07092 1604 aaPredicted RBP19.7■□□□□ 0.74
VAC14-210ENST00000568548 FAM205CA6NFA0 338 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 MYL5Q02045 173 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 TOGARAM2Q6ZUX3 1019 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 CCDC150Q8NCX0 1101 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 AIDAQ96BJ3 306 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 GPR108Q9NPR9 543 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 NUP188Q5SRE5 1749 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 SRCAPQ6ZRS2 3230 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 GYS2P54840 703 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 TRIM29Q14134 588 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 SYCP1Q15431 976 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 SMYD4Q8IYR2 804 aaPredicted RBP19.69■□□□□ 0.74
VAC14-210ENST00000568548 OXER1Q8TDS5 423 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 ZFP91Q96JP5 570 aaPredicted RBP19.69■□□□□ 0.74
VAC14-210ENST00000568548 SAMSN1Q9NSI8 373 aaKnown RBP19.69■□□□□ 0.74
VAC14-210ENST00000568548 AKAP2Q9Y2D5 859 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 AFMP43652 599 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 GNG11P61952 73 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 ETF1P62495 437 aaKnown RBP19.69■□□□□ 0.74
VAC14-210ENST00000568548 PTPAQ15257 358 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 TEX35Q5T0J7 233 aa19.69■□□□□ 0.74
VAC14-210ENST00000568548 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
VAC14-210ENST00000568548 ITGB4P16144 1822 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 OLFM4Q6UX06 510 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 MAGEB6Q8N7X4 407 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 FAM217BQ9NTX9 383 aaPredicted RBP19.68■□□□□ 0.74
VAC14-210ENST00000568548 IMPACTQ9P2X3 320 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 SERTAD1Q9UHV2 236 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 UBN2Q6ZU65 1347 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 STARD3NLO95772 234 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 EVCP57679 992 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 RFX7Q2KHR2 1363 aa19.68■□□□□ 0.74
VAC14-210ENST00000568548 COL22A1Q8NFW1 1626 aaPredicted RBP19.68■□□□□ 0.74
VAC14-210ENST00000568548 WTIPA6NIX2 430 aaPredicted RBP19.67■□□□□ 0.74
VAC14-210ENST00000568548 SH2B2O14492 632 aaPredicted RBP19.67■□□□□ 0.74
VAC14-210ENST00000568548 MBD4O95243 580 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 CCDC102BQ68D86 513 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 TRMT112Q9UI30 125 aaKnown RBP19.67■□□□□ 0.74
VAC14-210ENST00000568548 NFE2L3Q9Y4A8 694 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 PCDHB6Q9Y5E3 794 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 SLC12A7Q9Y666 1083 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
VAC14-210ENST00000568548 PDE6AP16499 860 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 ADD2P35612 726 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 SLC4A8Q2Y0W8 1093 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 TRIM65Q6PJ69 517 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
VAC14-210ENST00000568548 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.67■□□□□ 0.74
VAC14-210ENST00000568548 LZTFL1Q9NQ48 299 aa19.67■□□□□ 0.74
VAC14-210ENST00000568548 GABPB1Q06547 395 aaPredicted RBP19.66■□□□□ 0.74
VAC14-210ENST00000568548 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
VAC14-210ENST00000568548 NUTM2BA6NNL0 878 aaPredicted RBP19.66■□□□□ 0.74
VAC14-210ENST00000568548 NUTM2EB1AL46 878 aaPredicted RBP19.66■□□□□ 0.74
VAC14-210ENST00000568548 CIAO1O76071 339 aa19.66■□□□□ 0.74
VAC14-210ENST00000568548 NUTM2AQ8IVF1 878 aaPredicted RBP19.66■□□□□ 0.74
VAC14-210ENST00000568548 TTLL11Q8NHH1 800 aa19.66■□□□□ 0.74
VAC14-210ENST00000568548 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.66■□□□□ 0.74
VAC14-210ENST00000568548 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
VAC14-210ENST00000568548 PRDM1O75626 825 aa19.65■□□□□ 0.74
VAC14-210ENST00000568548 DIS3L2Q8IYB7 885 aaKnown RBP19.65■□□□□ 0.74
VAC14-210ENST00000568548 BCL9O00512 1426 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms