RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
KARS-209ENST00000568378 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
KARS-209ENST00000568378 TRIB2Q92519 343 aa12.18□□□□□ -0.46
KARS-209ENST00000568378 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
KARS-209ENST00000568378 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
KARS-209ENST00000568378 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
KARS-209ENST00000568378 CASP7P55210 303 aa12.17□□□□□ -0.46
KARS-209ENST00000568378 SMAD3P84022 425 aaKnown RBP12.17□□□□□ -0.46
KARS-209ENST00000568378 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
KARS-209ENST00000568378 SHHQ15465 462 aa12.17□□□□□ -0.46
KARS-209ENST00000568378 SCYL3Q8IZE3 742 aa12.17□□□□□ -0.46
KARS-209ENST00000568378 TRIM75PA6NK02 468 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 PTPRAP18433 802 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 CYP2B6P20813 491 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 USP38Q8NB14 1042 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 IL27Q8NEV9 243 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
KARS-209ENST00000568378 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
KARS-209ENST00000568378 MRIQ9BWK5 157 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
KARS-209ENST00000568378 GJD2Q9UKL4 321 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 AGTPBP1Q9UPW5 1226 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 AFG3L2Q9Y4W6 797 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 CDH23Q9H251 3354 aa12.16□□□□□ -0.46
KARS-209ENST00000568378 GCLCP48506 637 aaPredicted RBP12.15□□□□□ -0.46
KARS-209ENST00000568378 C9orf50Q5SZB4 431 aa12.15□□□□□ -0.46
KARS-209ENST00000568378 ADAMTS19Q8TE59 1207 aa12.15□□□□□ -0.46
KARS-209ENST00000568378 UHRF1Q96T88 793 aaPredicted RBP12.15□□□□□ -0.46
KARS-209ENST00000568378 IFT57Q9NWB7 429 aa12.15□□□□□ -0.46
KARS-209ENST00000568378 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
KARS-209ENST00000568378 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
KARS-209ENST00000568378 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
KARS-209ENST00000568378 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
KARS-209ENST00000568378 GNAI1P63096 354 aa12.14□□□□□ -0.47
KARS-209ENST00000568378 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
KARS-209ENST00000568378 HHIPL2Q6UWX4 724 aa12.14□□□□□ -0.47
KARS-209ENST00000568378 ATXN2LQ8WWM7 1075 aaKnown RBP12.14□□□□□ -0.47
KARS-209ENST00000568378 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
KARS-209ENST00000568378 MAST2Q6P0Q8 1798 aa12.14□□□□□ -0.47
KARS-209ENST00000568378 FOXO4P98177 505 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 CALD1Q05682 793 aaKnown RBP12.13□□□□□ -0.47
KARS-209ENST00000568378 CACNB2Q08289 660 aaPredicted RBP12.13□□□□□ -0.47
KARS-209ENST00000568378 NFIAQ12857 509 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 TREML2Q5T2D2 321 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 TRMT44Q8IYL2 757 aaKnown RBP12.13□□□□□ -0.47
KARS-209ENST00000568378 PPM1EQ8WY54 764 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 C1QTNF1Q9BXJ1 281 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 PRDM5Q9NQX1 630 aaPredicted RBP12.13□□□□□ -0.47
KARS-209ENST00000568378 THEGQ9P2T0 379 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
KARS-209ENST00000568378 SYNGAP1Q96PV0 1343 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 PTPRFP10586 1907 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
KARS-209ENST00000568378 RTP1P59025 263 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 PABPC4Q13310 644 aaKnown RBP eCLIP12.12□□□□□ -0.477e-18■■■■□ 25
KARS-209ENST00000568378 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 LHX8Q68G74 356 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 CDC42EP5Q6NZY7 148 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 SOCS4Q8WXH5 440 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 ASB2Q96Q27 587 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
KARS-209ENST00000568378 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
KARS-209ENST00000568378 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
KARS-209ENST00000568378 GRIN2CQ14957 1233 aa12.11□□□□□ -0.47
KARS-209ENST00000568378 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
KARS-209ENST00000568378 G2E3Q7L622 706 aa12.11□□□□□ -0.47
KARS-209ENST00000568378 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
KARS-209ENST00000568378 PROCA1Q8NCQ7 364 aaPredicted RBP12.11□□□□□ -0.47
KARS-209ENST00000568378 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
KARS-209ENST00000568378 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
KARS-209ENST00000568378 PLXNB2O15031 1838 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
KARS-209ENST00000568378 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
KARS-209ENST00000568378 CCDC84Q86UT8 332 aaPredicted RBP12.1□□□□□ -0.47
KARS-209ENST00000568378 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 BADQ92934 168 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 RNPC3Q96LT9 517 aaKnown RBP12.1□□□□□ -0.47
KARS-209ENST00000568378 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.1□□□□□ -0.47
KARS-209ENST00000568378 DAGLAQ9Y4D2 1042 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 DOCK1Q14185 1865 aa12.1□□□□□ -0.47
KARS-209ENST00000568378 DNAH12Q6ZR08 3092 aa12.09□□□□□ -0.47
KARS-209ENST00000568378 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
KARS-209ENST00000568378 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
KARS-209ENST00000568378 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
KARS-209ENST00000568378 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms