RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■■■■ 33.8
DNAAF4-CCPG1-202ENST00000568310 SPINK2P20155 84 aa12.16□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 TPTE2Q6XPS3 522 aa12.16□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 FANCD2OSQ96PS1 177 aa12.16□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 DAGLAQ9Y4D2 1042 aa12.16□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 DTX1Q86Y01 620 aa12.15□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 GATA6Q92908 595 aa12.15□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 FAM8A1Q9UBU6 413 aa12.15□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 MAP1SQ66K74 1059 aaPredicted RBP12.14□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 PIDD1Q9HB75 910 aa12.14□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 CBX8Q9HC52 389 aa12.14□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 TARBP1Q13395 1621 aaKnown RBP12.14□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 FAM170BA6NMN3 283 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 ENC1O14682 589 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 FBXO24O75426 580 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 FOSL1P15407 271 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 ZNF252P-AS1Q0IIN9 211 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 SEZ6L2Q6UXD5 910 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 FRMD6Q96NE9 622 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 DISC1Q9NRI5 854 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 RAD54L2Q9Y4B4 1467 aa12.13□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 DYNC1LI2O43237 492 aaPredicted RBP12.12□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 LGR6Q9HBX8 967 aa12.12□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 C1GALT1Q9NS00 363 aa12.12□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 SOGA1O94964 1423 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 ANKRD33BA6NCL7 494 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 USP17L7P0C7H9 530 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 BMP6P22004 513 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 CYP27A1Q02318 531 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 DUSP27Q5VZP5 1158 aa12.11□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 PAGE1O75459 146 aa12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 GPBAR1Q8TDU6 330 aa12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 RIMBP3CA6NJZ7 1639 aa12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 RIMBP3BA6NNM3 1639 aa12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 RIMBP3Q9UFD9 1639 aa12.1□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 CYP26A1O43174 497 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 GNA15P30679 374 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 FGD1P98174 961 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 GRIN3AQ8TCU5 1115 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 ACSBG1Q96GR2 724 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 CACNA2D2Q9NY47 1150 aa12.09□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.47
DNAAF4-CCPG1-202ENST00000568310 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 ADAMTS4O75173 837 aa12.08□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 ZNF765Q7L2R6 523 aa12.08□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CUX1P39880 1505 aa12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 WNT11O96014 354 aa12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 MSMPQ1L6U9 139 aa12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 EAPPQ56P03 285 aaPredicted RBP12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 OGFOD3Q6PK18 319 aa12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CHD1O14646 1710 aa12.06□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 EIF4BP23588 611 aaKnown RBP12.06□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 GP2P55259 537 aaKnown RBP12.06□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 ERVK-24P63145 666 aa12.06□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 LRRC14Q15048 493 aa12.06□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 TRIM37O94972 964 aa12.05□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CELA3AP09093 270 aa12.05□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 LLGL2Q6P1M3 1020 aa12.05□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 PCOLCE2Q9UKZ9 415 aa12.05□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 DUSP9Q99956 384 aaKnown RBP12.04□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 LRRC4CQ9HCJ2 640 aa12.04□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CYP8B1Q9UNU6 501 aa12.04□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 NEFMP07197 916 aa12.03□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CDK5R2Q13319 367 aa12.03□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 PCNX4Q63HM2 1172 aa12.03□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 SV2BQ7L1I2 683 aa12.03□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 OAS3Q9Y6K5 1087 aaKnown RBP12.03□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 AK5Q9Y6K8 562 aa12.03□□□□□ -0.48
DNAAF4-CCPG1-202ENST00000568310 CYP27C1Q4G0S4 372 aa12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 RASIP1Q5U651 963 aa12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 SCARA3Q6AZY7 606 aa12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 ISL2Q96A47 359 aa12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 SSU72Q9NP77 194 aaKnown RBP12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 RNF19AQ9NV58 838 aa12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 DNAJC14Q6Y2X3 702 aaPredicted RBP12.01□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 NPAS4Q8IUM7 802 aa12□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 BSDC1Q9NW68 430 aaPredicted RBP12□□□□□ -0.49
DNAAF4-CCPG1-202ENST00000568310 ZC3H7BQ9UGR2 993 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms