RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 FAM105AQ9NUU6 356 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 ACTL7BQ9Y614 415 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 FAM221AA4D161 298 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 MINDY4BA8MYZ0 360 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 NTF4P34130 210 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 LMNB2Q03252 620 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 BNC2Q6ZN30 1099 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 HS2ST1Q7LGA3 356 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 FANCD2OSQ96PS1 177 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 BCL11AQ9H165 835 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 ADAMTS1Q9UHI8 967 aa6.6□□□□□ -1.35
HERPUD1-212ENST00000567944 GFRA2O00451 464 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 RACK1P63244 317 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 ID3Q02535 119 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 UVSSAQ2YD98 709 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 ZNF394Q53GI3 561 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 C9orf131Q5VYM1 1079 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 FBXL19Q6PCT2 694 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 RELL1Q8IUW5 271 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 FAM20CQ8IXL6 584 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 RNF34Q969K3 372 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
HERPUD1-212ENST00000567944 DCDC2CA8MYV0 355 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 GREM1O60565 184 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 NEFMP07197 916 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 BMP3P12645 472 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 ERVK-24P63145 666 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 FAM160A1Q05DH4 1040 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 RAD51AP2Q09MP3 1159 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 CYFIP1Q7L576 1253 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 CCDC84Q86UT8 332 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 MIR1-1HGQ9H1L0 117 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 ACSS3Q9H6R3 686 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 DDX41Q9UJV9 622 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 AP4E1Q9UPM8 1137 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 PCDHGB7Q9Y5F8 929 aa6.58□□□□□ -1.36
HERPUD1-212ENST00000567944 SART1O43290 800 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 CILPO75339 1184 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 F13A1P00488 732 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 H2AFB1P0C5Y9 115 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 H2AFB2P0C5Z0 115 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 PWP1Q13610 501 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 PRR23CQ6ZRP0 262 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 C12orf40Q86WS4 652 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 NT5DC4Q86YG4 428 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 JARID2Q92833 1246 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 PLPPR2Q96GM1 343 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 ACSBG1Q96GR2 724 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 HIF3AQ9Y2N7 669 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 CSADQ9Y600 493 aa6.57□□□□□ -1.36
HERPUD1-212ENST00000567944 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 EIF4A3P38919 411 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 ASPAP45381 313 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 TTLL4Q14679 1199 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 SEZ6L2Q6UXD5 910 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 UBE3DQ7Z6J8 389 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 GOLM1Q8NBJ4 401 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 FBXO27Q8NI29 283 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 ZNF296Q8WUU4 475 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 GATAD2BQ8WXI9 593 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 SEMA6CQ9H3T2 930 aa6.56□□□□□ -1.36
HERPUD1-212ENST00000567944 HMX2A2RU54 273 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 BTBD11A6QL63 1104 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 E9PSI1 815 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 DYNC1LI2O43237 492 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 DYRK3O43781 588 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 GAS2O43903 313 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 NFICP08651 508 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 CRKP46108 304 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 WIPI1Q5MNZ9 446 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 FAM196AQ6ZSG2 479 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 USP48Q86UV5 1035 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 RNF214Q8ND24 703 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 ATXN3LQ9H3M9 355 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 SNCAIPQ9Y6H5 919 aa6.55□□□□□ -1.36
HERPUD1-212ENST00000567944 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 HCLS1P14317 486 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 TCF3P15923 654 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 USP11P51784 963 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 RPL6Q02878 288 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 ZBTB37Q5TC79 503 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 SHISA5Q8N114 240 aa6.54□□□□□ -1.36
HERPUD1-212ENST00000567944 ISL2Q96A47 359 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms