RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CCDC74AQ96AQ1 378 aa7.44□□□□□ -1.22
CAPN3-217ENST00000567817 TCF12Q99081 682 aa7.44□□□□□ -1.22
CAPN3-217ENST00000567817 SOX17Q9H6I2 414 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-217ENST00000567817 ZC3H13Q5T200 1668 aaKnown RBP7.44□□□□□ -1.22
CAPN3-217ENST00000567817 DHX29Q7Z478 1369 aaKnown RBP7.44□□□□□ -1.22
CAPN3-217ENST00000567817 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
CAPN3-217ENST00000567817 METTL12A8MUP2 240 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 C19orf57Q0VDD7 668 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 IKBKEQ14164 716 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 DSC3Q14574 896 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 NKAPLQ5M9Q1 402 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 ZSCAN29Q8IWY8 852 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-217ENST00000567817 SLC7A3Q8WY07 619 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 KLHDC7BQ96G42 594 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 KCNK4Q9NYG8 393 aa7.43□□□□□ -1.22
CAPN3-217ENST00000567817 ABCC3O15438 1527 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
CAPN3-217ENST00000567817 ROBO1Q9Y6N7 1651 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 A0A096LPE4 126 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 A0A1W2PPZ6 126 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-217ENST00000567817 ADAM11O75078 769 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 WISP1O95388 367 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 H2AFB1P0C5Y9 115 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 H2AFB2P0C5Z0 115 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 ACAD11Q709F0 780 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 FOXD4L4Q8WXT5 416 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-217ENST00000567817 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 ASB16Q96NS5 453 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 EHD4Q9H223 541 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 WASHC2CQ9Y4E1 1318 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 MTUS2Q5JR59 1369 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 EHBP1L1Q8N3D4 1523 aa7.42□□□□□ -1.22
CAPN3-217ENST00000567817 SOX1O00570 391 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-217ENST00000567817 ESRRAP11474 423 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-217ENST00000567817 RXRBP28702 533 aa7.41□□□□□ -1.22
CAPN3-217ENST00000567817 GRIA4P48058 902 aa7.41□□□□□ -1.22
CAPN3-217ENST00000567817 PRPF40BQ6NWY9 871 aaKnown RBP7.41□□□□□ -1.22
CAPN3-217ENST00000567817 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
CAPN3-217ENST00000567817 CLEC4MQ9H2X3 399 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-217ENST00000567817 TRAK1Q9UPV9 953 aa7.41□□□□□ -1.22
CAPN3-217ENST00000567817 NKTRP30414 1462 aaKnown RBP7.41□□□□□ -1.22
CAPN3-217ENST00000567817 SLIT1O75093 1534 aa7.41□□□□□ -1.22
CAPN3-217ENST00000567817 DDX3YO15523 660 aaKnown RBP7.4□□□□□ -1.22
CAPN3-217ENST00000567817 DYRK3O43781 588 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 GADD45BO75293 160 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-217ENST00000567817 ALX3O95076 343 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 ITPKAP23677 461 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 PLCB3Q01970 1234 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
CAPN3-217ENST00000567817 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
CAPN3-217ENST00000567817 AEBP1Q8IUX7 1158 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 AGGF1Q8N302 714 aaeCLIP7.4□□□□□ -1.22
CAPN3-217ENST00000567817 UBASH3BQ8TF42 649 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 CFDP1Q9UEE9 299 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-217ENST00000567817 ARHGAP23Q9P227 1491 aa7.4□□□□□ -1.22
CAPN3-217ENST00000567817 XIRP1Q702N8 1843 aaKnown RBP7.4□□□□□ -1.23
CAPN3-217ENST00000567817 CAMSAP2Q08AD1 1489 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 HFM1A2PYH4 1435 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 MSH6P52701 1360 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 TMEM94Q12767 1356 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 PNMA6FA0A0J9YX94 578 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 GLB1P16278 677 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 HNRNPMP52272 730 aaKnown RBP eCLIP7.39□□□□□ -1.23
CAPN3-217ENST00000567817 NLRP12P59046 1061 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 FMR1Q06787 632 aaKnown RBP eCLIP7.39□□□□□ -1.23
CAPN3-217ENST00000567817 PCDH1Q08174 1060 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
CAPN3-217ENST00000567817 SPRED3Q2MJR0 410 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 MEX3CQ5U5Q3 659 aaKnown RBP7.39□□□□□ -1.23
CAPN3-217ENST00000567817 KIAA1211Q6ZU35 1233 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 SND1Q7KZF4 910 aaKnown RBP eCLIP7.39□□□□□ -1.23
CAPN3-217ENST00000567817 CEP41Q9BYV8 373 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 SEMA6BQ9H3T3 888 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 ZNF576Q9H609 170 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 NLRP2Q9NX02 1062 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 EID1Q9Y6B2 187 aa7.39□□□□□ -1.23
CAPN3-217ENST00000567817 PHLPP1O60346 1717 aa7.38□□□□□ -1.23
CAPN3-217ENST00000567817 LRRIQ1Q96JM4 1722 aa7.38□□□□□ -1.23
CAPN3-217ENST00000567817 PRDM15P57071 1507 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-217ENST00000567817 MYOM3Q5VTT5 1437 aa7.38□□□□□ -1.23
CAPN3-217ENST00000567817 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
CAPN3-217ENST00000567817 EPS8L3Q8TE67 593 aaKnown RBP7.38□□□□□ -1.23
CAPN3-217ENST00000567817 FBF1Q8TES7 1133 aa7.38□□□□□ -1.23
CAPN3-217ENST00000567817 RNF208Q9H0X6 261 aa7.38□□□□□ -1.23
CAPN3-217ENST00000567817 ERVK-7P63135 1459 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 NCOA3Q9Y6Q9 1424 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 KIF3BO15066 747 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 KCNA6P17658 529 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 GRM2Q14416 872 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 UVSSAQ2YD98 709 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 RUSC1Q9BVN2 902 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 UBR1Q8IWV7 1749 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 SHPRHQ149N8 1683 aa7.37□□□□□ -1.23
CAPN3-217ENST00000567817 COL16A1Q07092 1604 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-217ENST00000567817 NCOA2Q15596 1464 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms