RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 PRMT2P55345 433 aa28.48■■■□□ 2.15
CNEP1R1-209ENST00000567712 API5Q9BZZ5 524 aaKnown RBP28.48■■■□□ 2.15
CNEP1R1-209ENST00000567712 ZHX2Q9Y6X8 837 aa28.48■■■□□ 2.15
CNEP1R1-209ENST00000567712 CXCL11O14625 94 aa28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 ENTPD3O75355 529 aa28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 FMNL1O95466 1100 aaPredicted RBP28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 PTPRAP18433 802 aa28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 MAP3K10Q02779 954 aa28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 SCYL3Q8IZE3 742 aa28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 ABCF2Q9UG63 623 aa28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 COLQQ9Y215 455 aaPredicted RBP28.47■■■□□ 2.15
CNEP1R1-209ENST00000567712 TRIOBPQ9H2D6 2365 aa28.46■■■□□ 2.15
CNEP1R1-209ENST00000567712 FXR1P51114 621 aaKnown RBP eCLIP28.46■■■□□ 2.15
CNEP1R1-209ENST00000567712 TFCP2Q12800 502 aa28.46■■■□□ 2.15
CNEP1R1-209ENST00000567712 XAGE2Q96GT9 111 aa28.46■■■□□ 2.15
CNEP1R1-209ENST00000567712 AFG3L2Q9Y4W6 797 aa28.46■■■□□ 2.15
CNEP1R1-209ENST00000567712 MYPNQ86TC9 1320 aa28.45■■■□□ 2.15
CNEP1R1-209ENST00000567712 A0A0G2JLL6 359 aaPredicted RBP28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 A0A1B0GUL7 405 aa28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 CT47B1P0C2W7 299 aaPredicted RBP28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 RARSP54136 660 aaKnown RBP28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 PRRT2Q7Z6L0 340 aaPredicted RBP28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 CCDC84Q86UT8 332 aaPredicted RBP28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 GABRQQ9UN88 632 aa28.45■■■□□ 2.14
CNEP1R1-209ENST00000567712 H0YGN5 161 aa28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 GRK4P32298 578 aa28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 BTDP43251 543 aa28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 PRKCZQ05513 592 aa28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 PICALMQ13492 652 aa28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 DZIP1Q86YF9 867 aaKnown RBP28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 ZGPATQ8N5A5 531 aaKnown RBP28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 FAM163AQ96GL9 167 aaPredicted RBP28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 PARK7Q99497 189 aaKnown RBP28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 TNNQ9UQP3 1299 aa28.44■■■□□ 2.14
CNEP1R1-209ENST00000567712 ZSCAN29Q8IWY8 852 aaPredicted RBP28.43■■■□□ 2.14
CNEP1R1-209ENST00000567712 RAET1EQ8TD07 263 aa28.43■■■□□ 2.14
CNEP1R1-209ENST00000567712 PDS5AQ29RF7 1337 aaKnown RBP28.43■■■□□ 2.14
CNEP1R1-209ENST00000567712 HOXD10P28358 340 aa28.42■■■□□ 2.14
CNEP1R1-209ENST00000567712 RHBDL3P58872 404 aa28.42■■■□□ 2.14
CNEP1R1-209ENST00000567712 MECOMQ03112 1051 aa28.42■■■□□ 2.14
CNEP1R1-209ENST00000567712 PI16Q6UXB8 463 aa28.42■■■□□ 2.14
CNEP1R1-209ENST00000567712 MROH7-TTC4A0A0A0MT08 1334 aa28.42■■■□□ 2.14
CNEP1R1-209ENST00000567712 SRGAP3O43295 1099 aa28.41■■■□□ 2.14
CNEP1R1-209ENST00000567712 GADL1Q6ZQY3 521 aa28.41■■■□□ 2.14
CNEP1R1-209ENST00000567712 PICK1Q9NRD5 415 aa28.41■■■□□ 2.14
CNEP1R1-209ENST00000567712 FAM196BA6NMK8 535 aa28.4■■■□□ 2.14
CNEP1R1-209ENST00000567712 CCL5P13501 91 aa28.4■■■□□ 2.14
CNEP1R1-209ENST00000567712 MTX1Q13505 466 aa28.4■■■□□ 2.14
CNEP1R1-209ENST00000567712 ATAD5Q96QE3 1844 aa28.4■■■□□ 2.14
CNEP1R1-209ENST00000567712 SZT2Q5T011 3432 aa28.4■■■□□ 2.14
CNEP1R1-209ENST00000567712 GPR75-ASB3A0A0A6YYF3 556 aa28.39■■■□□ 2.14
CNEP1R1-209ENST00000567712 TBC1D9Q6ZT07 1266 aa28.39■■■□□ 2.14
CNEP1R1-209ENST00000567712 FASTKD5Q7L8L6 764 aaKnown RBP28.39■■■□□ 2.14
CNEP1R1-209ENST00000567712 UBE2Q1Q7Z7E8 422 aa28.39■■■□□ 2.14
CNEP1R1-209ENST00000567712 HMG20BQ9P0W2 317 aa28.39■■■□□ 2.14
CNEP1R1-209ENST00000567712 HDAC5Q9UQL6 1122 aa28.39■■■□□ 2.14
CNEP1R1-209ENST00000567712 CTNND1O60716 968 aaKnown RBP28.38■■■□□ 2.13
CNEP1R1-209ENST00000567712 FCGRTP55899 365 aa28.38■■■□□ 2.13
CNEP1R1-209ENST00000567712 ERICH6Q7L0X2 663 aa28.38■■■□□ 2.13
CNEP1R1-209ENST00000567712 TRIM75PA6NK02 468 aa28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 GJA8P48165 433 aa28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 SPTY2D1Q68D10 685 aaPredicted RBP28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 ARHGAP45Q92619 1136 aa28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 NEUROD6Q96NK8 337 aa28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 RNF208Q9H0X6 261 aa28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 AKAP2Q9Y2D5 859 aa28.37■■■□□ 2.13
CNEP1R1-209ENST00000567712 MYO5AQ9Y4I1 1855 aaKnown RBP28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 RANBP2P49792 3224 aaKnown RBP28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 GJB1P08034 283 aa28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 RRP1BQ14684 758 aaKnown RBP28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 MVPQ14764 893 aaKnown RBP28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 SLF2Q8IX21 1173 aa28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 UNC93B1Q9H1C4 597 aa28.36■■■□□ 2.13
CNEP1R1-209ENST00000567712 SIPA1L1O43166 1804 aa28.35■■■□□ 2.13
CNEP1R1-209ENST00000567712 GNAI3P08754 354 aa28.35■■■□□ 2.13
CNEP1R1-209ENST00000567712 TREML2Q5T2D2 321 aa28.35■■■□□ 2.13
CNEP1R1-209ENST00000567712 NSUN4Q96CB9 384 aaKnown RBP28.35■■■□□ 2.13
CNEP1R1-209ENST00000567712 BIN2Q9UBW5 565 aaPredicted RBP28.35■■■□□ 2.13
CNEP1R1-209ENST00000567712 SLC45A1Q9Y2W3 748 aa28.35■■■□□ 2.13
CNEP1R1-209ENST00000567712 CDK5RAP2Q96SN8 1893 aa28.34■■■□□ 2.13
CNEP1R1-209ENST00000567712 PNMA6EA0A0J9YXQ4 647 aa28.34■■■□□ 2.13
CNEP1R1-209ENST00000567712 FLT3LGP49771 235 aa28.34■■■□□ 2.13
CNEP1R1-209ENST00000567712 SPATA5Q8NB90 893 aa28.34■■■□□ 2.13
CNEP1R1-209ENST00000567712 LOC285556D6RIA3 1793 aa28.33■■■□□ 2.13
CNEP1R1-209ENST00000567712 TBC1D12O60347 775 aa28.33■■■□□ 2.13
CNEP1R1-209ENST00000567712 TRIM27P14373 513 aa28.33■■■□□ 2.13
CNEP1R1-209ENST00000567712 ELNP15502 786 aa28.33■■■□□ 2.13
CNEP1R1-209ENST00000567712 ADCY3O60266 1144 aa28.32■■■□□ 2.12
CNEP1R1-209ENST00000567712 MCAMP43121 646 aa28.32■■■□□ 2.12
CNEP1R1-209ENST00000567712 SLAIN1Q8ND83 568 aa28.32■■■□□ 2.12
CNEP1R1-209ENST00000567712 DPF3Q92784 378 aa28.32■■■□□ 2.12
CNEP1R1-209ENST00000567712 AGTPBP1Q9UPW5 1226 aa28.32■■■□□ 2.12
CNEP1R1-209ENST00000567712 NPM3O75607 178 aaKnown RBP28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 BCAR3O75815 825 aa28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 ARID4AP29374 1257 aaPredicted RBP28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 UBXN2AP68543 259 aa28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 CHRDL2Q6WN34 429 aa28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 ANKRD13CQ8N6S4 541 aa28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 NKX2-3Q8TAU0 364 aa28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 U2AF1L4Q8WU68 220 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms