RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 STAMQ92783 540 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 CAPS2Q9BXY5 557 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 MTRF1LQ9UGC7 380 aaKnown RBP13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 IQSEC3Q9UPP2 1182 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 MICAL1Q8TDZ2 1067 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 IFT74Q96LB3 600 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 ATP10AO60312 1499 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 ATP11AP98196 1134 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 KRT40Q6A162 431 aa13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P13-202ENST00000567704 B4E1Z4 1266 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 CCDC172P0C7W6 258 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 CYP7A1P22680 504 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 CDC25BP30305 580 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 ADCK5Q3MIX3 580 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 KLHL7Q8IXQ5 586 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 PHKBQ93100 1093 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 EYA1Q99502 592 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 TRIM31Q9BZY9 425 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 IKBKGQ9Y6K9 419 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 ATP7AQ04656 1500 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 TMEM110-MUSTN1A8MSY1 372 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 DTHD1Q6ZMT9 781 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 UNC5CLQ8IV45 518 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 ZFYVE9O95405 1425 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 GCKP35557 465 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 MAGEA1P43355 309 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 PAK2Q13177 524 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 EDC3Q96F86 508 aaKnown RBP13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 STIM2Q9P246 746 aa13.91□□□□□ -0.18
CSPG4P13-202ENST00000567704 MYO1CO00159 1063 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 RBM5P52756 815 aaKnown RBP eCLIP13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 PAK1Q13153 545 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 PTPN21Q16825 1174 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 TTC19Q6DKK2 380 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 SYCP3Q8IZU3 236 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 CCDC26Q8TAB7 109 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 PPP1R14CQ8TAE6 165 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 LRRC45Q96CN5 670 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 TMOD3Q9NYL9 352 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 PRPHP41219 470 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 ARID5BQ14865 1188 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 SWAP70Q9UH65 585 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 ANKRD65E5RJM6 399 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 CLGNO14967 610 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 NDUFA8P51970 172 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 RAPGEF1Q13905 1077 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 SRGAP1Q7Z6B7 1085 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 LMNTD2Q8IXW0 634 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 CSGALNACT2Q8N6G5 542 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 PPFIBP2Q8ND30 876 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 EXOC4Q96A65 974 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 EFCC1Q9HA90 598 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 GYS2P54840 703 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 SERTAD1Q9UHV2 236 aa13.9□□□□□ -0.18
CSPG4P13-202ENST00000567704 TNNI3KQ59H18 835 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 TACO1Q9BSH4 297 aaKnown RBP13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 PARD6BQ9BYG5 372 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 CDC23Q9UJX2 597 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 ANGEL1Q9UNK9 670 aaKnown RBP13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 FPGT-TNNI3KV9GXZ4 949 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 TTC37Q6PGP7 1564 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 BEND3Q5T5X7 828 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 RPGRIP1Q96KN7 1286 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 STAMBPO95630 424 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 CALML3P27482 149 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 ZBTB22O15209 634 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 TBCAO75347 108 aaKnown RBP13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 IQCGQ9H095 443 aaKnown RBP13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 KIF24Q5T7B8 1368 aa13.89□□□□□ -0.19
CSPG4P13-202ENST00000567704 A0A0D9SFI3 127 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 STX10O60499 249 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 CALCOCO2Q13137 446 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 SPATA24Q86W54 205 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 MAGI2Q86UL8 1455 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 SMC6Q96SB8 1091 aa13.88□□□□□ -0.19
CSPG4P13-202ENST00000567704 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms