RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 USP17L21D6R901 530 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
BBS4-213ENST00000567279 BTDP43251 543 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 USP5P45974 858 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
BBS4-213ENST00000567279 KIF13BQ9NQT8 1826 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 ADAMTSL1Q8N6G6 1762 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 CTDNEP1O95476 244 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 CYP2D6P10635 497 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 SLF2Q8IX21 1173 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 FAM184AQ8NB25 1140 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
BBS4-213ENST00000567279 DDX60LQ5H9U9 1706 aaKnown RBP13.77□□□□□ -0.2
BBS4-213ENST00000567279 PPP4CP60510 307 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 HMGN5P82970 282 aaKnown RBP13.77□□□□□ -0.21
BBS4-213ENST00000567279 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
BBS4-213ENST00000567279 IGDCC4Q8TDY8 1250 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 ESR2Q92731 530 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 DBNDD1Q9H9R9 158 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 LY9Q9HBG7 655 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 HPS5Q9UPZ3 1129 aa13.77□□□□□ -0.21
BBS4-213ENST00000567279 F8W031 263 aaPredicted RBP13.76□□□□□ -0.21
BBS4-213ENST00000567279 EVX2Q03828 476 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 SLC4A8Q2Y0W8 1093 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 CDC37L1Q7L3B6 337 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 ZNF646O15015 1829 aaPredicted RBP13.76□□□□□ -0.21
BBS4-213ENST00000567279 FOCADQ5VW36 1801 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 ECM29Q5VYK3 1845 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 ERICH2A1L162 156 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
BBS4-213ENST00000567279 PPFIA3O75145 1194 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 PRDM1O75626 825 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 ZBTB7AO95365 584 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
BBS4-213ENST00000567279 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 PDIA4P13667 645 aaKnown RBP13.76□□□□□ -0.21
BBS4-213ENST00000567279 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
BBS4-213ENST00000567279 FOSBP53539 338 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 WTAPQ15007 396 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 SNED1Q8TER0 1413 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 TGFBRAP1Q8WUH2 860 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 C7orf43Q8WVR3 580 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 UBAC1Q9BSL1 405 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 MXD3Q9BW11 206 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 LMBRD1Q9NUN5 540 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 ATP6V1DQ9Y5K8 247 aa13.76□□□□□ -0.21
BBS4-213ENST00000567279 TCHHQ07283 1943 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 GAKO14976 1311 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 SCN9AQ15858 1988 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 MYH1P12882 1939 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 H3BQV1 296 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 CPLX1O14810 134 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 ZBTB43O43298 467 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 C21orf2O43822 256 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 ECE2O60344 883 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 RXRAP19793 462 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 LIFRP42702 1097 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
BBS4-213ENST00000567279 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 SGMS1Q86VZ5 419 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 MAPKAPK5Q8IW41 473 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 TTLL6Q8N841 843 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 SUGT1Q9Y2Z0 365 aa13.75□□□□□ -0.21
BBS4-213ENST00000567279 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 RANBP6O60518 1105 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 PCP11498 1178 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 DPEP1P16444 411 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 PLCG2P16885 1265 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 AOC3Q16853 763 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 PODNQ7Z5L7 613 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 AMOTL1Q8IY63 956 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 TTF2Q9UNY4 1162 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
BBS4-213ENST00000567279 DAGLAQ9Y4D2 1042 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 CCDC144CPQ8IYA2 1237 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 SUPT20HQ8NEM7 779 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms