RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 CRACR2BQ8N4Y2 399 aaPredicted RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 NEK11Q8NG66 645 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 AFAP1L1Q8TED9 768 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 CNKSR2Q8WXI2 1034 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 DDX21Q9NR30 783 aaKnown RBP eCLIP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 BCCIPQ9P287 314 aaKnown RBP eCLIP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 MTUS1Q9ULD2 1270 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 DEXIO95424 95 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 LMOD1P29536 600 aaPredicted RBP4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 CDC25BP30305 580 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 APBA1Q02410 837 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 KRT79Q5XKE5 535 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC174Q6PII3 467 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 SYT10Q6XYQ8 523 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 TRMT2AQ8IZ69 625 aaKnown RBP4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 FBF1Q8TES7 1133 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 CSRNP2Q9H175 543 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 SAMD15Q9P1V8 674 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 ABCC4O15439 1325 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 PSDA5PKW4 1024 aaPredicted RBP4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 ERVV-2B6SEH9 535 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 PPFIA3O75145 1194 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 CTNNA2P26232 953 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 ALDH3A1P30838 453 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 SSR1P43307 286 aaKnown RBP4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 MAP3K9P80192 1104 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 MTMR3Q13615 1198 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 UTP14CQ5TAP6 766 aaKnown RBP4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 SUPT20HQ8NEM7 779 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 FERMT2Q96AC1 680 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 RRAGDQ9NQL2 400 aaPredicted RBP4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 UBR1Q8IWV7 1749 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 LRRIQ1Q96JM4 1722 aa4.9□□□□□ -1.63
LPCAT2-208ENST00000566915 A0A1W2PP64 1363 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 FAM177BA6PVY3 158 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 MPHOSPH10O00566 681 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 NEBLO76041 1014 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 NT5C2P49902 561 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CHMP4BP1P59074 171 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 WHAMMP3Q1A5X7 153 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ANO1Q5XXA6 986 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC84Q86UT8 332 aaPredicted RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 IFT20Q8IY31 132 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 C10orf67Q8IYJ2 551 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ATRIPQ8WXE1 791 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CHPF2Q9P2E5 772 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 USP6P35125 1406 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 NEXMIFQ5QGS0 1516 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 PPFIA4O75335 1185 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ATP2A2P16615 1042 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 SETDB1Q15047 1291 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ZNF569Q5MCW4 686 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 DDX46Q7L014 1031 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ZSCAN29Q8IWY8 852 aaPredicted RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 DHX37Q8IY37 1157 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC110Q8TBZ0 833 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 TSNARE1Q96NA8 513 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ZNF830Q96NB3 372 aaPredicted RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 MPHOSPH6Q99547 160 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 TRIM7Q9C029 511 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 HOMER2Q9NSB8 354 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 VPS18Q9P253 973 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CEP83Q9Y592 693 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 RIOK3O14730 519 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 RGS12O14924 1447 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ACTN4O43707 911 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 LACTBP83111 547 aaPredicted RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 TCERG1LQ5VWI1 586 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CNNM4Q6P4Q7 775 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 DTHD1Q6ZMT9 781 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 MICALL1Q8N3F8 863 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 KIAA1524Q8TCG1 905 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CARD14Q9BXL6 1004 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 OSBPL3Q9H4L5 887 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 MED4Q9NPJ6 270 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 STIM2Q9P246 746 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 FBXO3Q9UK99 471 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 SPATA31A5Q5VU36 1347 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 SPATA31A7Q8IWB4 1347 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 FAM83GA6ND36 823 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 EFCAB8A8MWE9 144 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 SEC24BO95487 1268 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 ASIC1P78348 528 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 UBXN1Q04323 297 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 GBP6Q6ZN66 633 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 HS2ST1Q7LGA3 356 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CPLX4Q7Z7G2 160 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 MSANTD4Q8NCY6 345 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 LEO1Q8WVC0 666 aaPredicted RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 SMC6Q96SB8 1091 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 LZTS2Q9BRK4 669 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 DSCC1Q9BVC3 393 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 IQCGQ9H095 443 aaKnown RBP4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 CABP5Q9NP86 173 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 MYO1AQ9UBC5 1043 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 SNX14Q9Y5W7 946 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 TMEM131LA2VDJ0 1609 aa4.89□□□□□ -1.63
LPCAT2-208ENST00000566915 A0A1W2PRG0 241 aa4.88□□□□□ -1.63
LPCAT2-208ENST00000566915 FERP16591 822 aa4.88□□□□□ -1.63
LPCAT2-208ENST00000566915 IRX3P78415 501 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms