RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 WRNIP1Q96S55 665 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 DBNDD2Q9BQY9 259 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 FPGT-TNNI3KV9GXZ4 949 aa12.43□□□□□ -0.42
GTF3C1-206ENST00000566779 SALL1Q9NSC2 1324 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 MS4A1P11836 297 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 BTDP43251 543 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 VGLL4Q14135 290 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 CEP85Q6P2H3 762 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
GTF3C1-206ENST00000566779 MYH1P12882 1939 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 MANSC4A6NHS7 340 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 ZBTB48P10074 688 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 GJA5P36382 358 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 MCAMP43121 646 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 RGS3P49796 1198 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 MECOMQ03112 1051 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 MAP3K11Q16584 847 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 ZKSCAN4Q969J2 545 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 TLR7Q9NYK1 1049 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 RPAP1Q9BWH6 1393 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 MYH7P12883 1935 aa12.41□□□□□ -0.42
GTF3C1-206ENST00000566779 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 ZSWIM8A7E2V4 1837 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 FAM83AQ86UY5 434 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 AACSQ86V21 672 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 HOOK2Q96ED9 719 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 ZNF341Q9BYN7 854 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 DDX19BQ9UMR2 479 aa12.4□□□□□ -0.42
GTF3C1-206ENST00000566779 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 PTPRFP10586 1907 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 INPP5BP32019 993 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 GSTO1P78417 241 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 CCL15Q16663 113 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 C20orf194Q5TEA3 1177 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 FKBP1CQ5VVH2 108 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 ZNF296Q8WUU4 475 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 FAM151AQ8WW52 585 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 MRIQ9BWK5 157 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
GTF3C1-206ENST00000566779 GAKO14976 1311 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 TM4SF4P48230 202 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 ERC1Q8IUD2 1116 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 R3HDMLQ9H3Y0 253 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 SNCAIPQ9Y6H5 919 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 MYH8P13535 1937 aa12.38□□□□□ -0.43
GTF3C1-206ENST00000566779 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 GPR25O00155 361 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 HMMRO75330 724 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 ALDH1A1P00352 501 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 LDHCP07864 332 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 ZAP70P43403 619 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 OTUD7BQ6GQQ9 843 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 NAA16Q6N069 864 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 CTU1Q7Z7A3 348 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 TEX11Q8IYF3 940 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 EAF2Q96CJ1 260 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 GPR108Q9NPR9 543 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 DDX4Q9NQI0 724 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
GTF3C1-206ENST00000566779 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 FAM196BA6NMK8 535 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 FKTNO75072 461 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 CRHR2Q13324 411 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 TAF1CQ15572 869 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 E2F4Q16254 413 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 NSUN4Q96CB9 384 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 PIH1D3Q9NQM4 214 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
GTF3C1-206ENST00000566779 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms