RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ATRNL1Q5VV63 1379 aa34.1■■■■□ 3.05
UBFD1-206ENST00000566669 MECOMQ03112 1051 aa34.09■■■■□ 3.05
UBFD1-206ENST00000566669 GPR108Q9NPR9 543 aa34.09■■■■□ 3.05
UBFD1-206ENST00000566669 HMG20BQ9P0W2 317 aa34.09■■■■□ 3.05
UBFD1-206ENST00000566669 PDHXO00330 501 aa34.08■■■■□ 3.05
UBFD1-206ENST00000566669 FASTKD5Q7L8L6 764 aaKnown RBP34.08■■■■□ 3.05
UBFD1-206ENST00000566669 PARK7Q99497 189 aaKnown RBP34.08■■■■□ 3.05
UBFD1-206ENST00000566669 PNMA6EA0A0J9YXQ4 647 aa34.07■■■■□ 3.04
UBFD1-206ENST00000566669 PHF20L1A8MW92 1017 aa34.07■■■■□ 3.04
UBFD1-206ENST00000566669 CTNND1O60716 968 aaKnown RBP34.07■■■■□ 3.04
UBFD1-206ENST00000566669 C17orf99Q6UX52 265 aa34.07■■■■□ 3.04
UBFD1-206ENST00000566669 ZFPM1Q8IX07 1006 aa34.07■■■■□ 3.04
UBFD1-206ENST00000566669 ZNF333Q96JL9 665 aa34.07■■■■□ 3.04
UBFD1-206ENST00000566669 HOXD10P28358 340 aa34.06■■■■□ 3.04
UBFD1-206ENST00000566669 TBC1D12O60347 775 aa34.05■■■■□ 3.04
UBFD1-206ENST00000566669 FTSJ3Q8IY81 847 aaKnown RBP34.05■■■■□ 3.04
UBFD1-206ENST00000566669 TMEM57Q8N5G2 664 aa34.05■■■■□ 3.04
UBFD1-206ENST00000566669 PTCH2Q9Y6C5 1203 aa34.05■■■■□ 3.04
UBFD1-206ENST00000566669 RBBP6Q7Z6E9 1792 aaKnown RBP34.04■■■■□ 3.04
UBFD1-206ENST00000566669 CAP1Q01518 475 aa34.04■■■■□ 3.04
UBFD1-206ENST00000566669 NSUN4Q96CB9 384 aaKnown RBP34.04■■■■□ 3.04
UBFD1-206ENST00000566669 DOCK2Q92608 1830 aa34.03■■■■□ 3.04
UBFD1-206ENST00000566669 PTPRAP18433 802 aa34.03■■■■□ 3.04
UBFD1-206ENST00000566669 HNRNPUQ00839 825 aaKnown RBP eCLIP34.03■■■■□ 3.04
UBFD1-206ENST00000566669 POLA2Q14181 598 aa34.03■■■■□ 3.04
UBFD1-206ENST00000566669 SLC45A1Q9Y2W3 748 aa34.03■■■■□ 3.04
UBFD1-206ENST00000566669 ZHX2Q9Y6X8 837 aa34.03■■■■□ 3.04
UBFD1-206ENST00000566669 COL2A1P02458 1487 aaPredicted RBP34.02■■■■□ 3.04
UBFD1-206ENST00000566669 POTEFA5A3E0 1075 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 RHBDL3P58872 404 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 PICALMQ13492 652 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 CCDC158Q5M9N0 1113 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 SH3BP5LQ7L8J4 393 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 SSH3Q8TE77 659 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 NOL10Q9BSC4 688 aaKnown RBP34.02■■■■□ 3.04
UBFD1-206ENST00000566669 RAI14Q9P0K7 980 aa34.02■■■■□ 3.04
UBFD1-206ENST00000566669 A0A0G2JLL6 359 aaPredicted RBP34.01■■■■□ 3.03
UBFD1-206ENST00000566669 DDTLA6NHG4 134 aaPredicted RBP34.01■■■■□ 3.03
UBFD1-206ENST00000566669 ATP8B2P98198 1209 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 OS9Q13438 667 aaPredicted RBP34.01■■■■□ 3.03
UBFD1-206ENST00000566669 MOGSQ13724 837 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 PRRT2Q7Z6L0 340 aaPredicted RBP34.01■■■■□ 3.03
UBFD1-206ENST00000566669 TBC1D2Q9BYX2 928 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 DDX4Q9NQI0 724 aaKnown RBP34.01■■■■□ 3.03
UBFD1-206ENST00000566669 LRP2BPQ9P2M1 347 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 TNNQ9UQP3 1299 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 CENPFP49454 3210 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 ADGRA2Q96PE1 1338 aa34.01■■■■□ 3.03
UBFD1-206ENST00000566669 AFG3L2Q9Y4W6 797 aa34■■■■□ 3.03
UBFD1-206ENST00000566669 KIAA0100Q14667 2235 aaKnown RBP33.99■■■■□ 3.03
UBFD1-206ENST00000566669 PLCG2P16885 1265 aa33.99■■■■□ 3.03
UBFD1-206ENST00000566669 GCC1Q96CN9 775 aa33.99■■■■□ 3.03
UBFD1-206ENST00000566669 CPA4Q9UI42 421 aa33.99■■■■□ 3.03
UBFD1-206ENST00000566669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.99■■■■□ 3.03
UBFD1-206ENST00000566669 BAG3O95817 575 aa33.98■■■■□ 3.03
UBFD1-206ENST00000566669 MCAMP43121 646 aa33.98■■■■□ 3.03
UBFD1-206ENST00000566669 PSMC4P43686 418 aa33.98■■■■□ 3.03
UBFD1-206ENST00000566669 ZNF512BQ96KM6 892 aaPredicted RBP33.98■■■■□ 3.03
UBFD1-206ENST00000566669 OSBPL5Q9H0X9 879 aaPredicted RBP33.98■■■■□ 3.03
UBFD1-206ENST00000566669 SLC4A8Q2Y0W8 1093 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 TNNI3KQ59H18 835 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 TTC39AQ5SRH9 613 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 ZNF384Q8TF68 577 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 ARHGAP39Q9C0H5 1083 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 SRRDQ9UH36 339 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 FPGT-TNNI3KV9GXZ4 949 aa33.97■■■■□ 3.03
UBFD1-206ENST00000566669 GPAT2Q6NUI2 795 aa33.96■■■■□ 3.03
UBFD1-206ENST00000566669 PI16Q6UXB8 463 aa33.96■■■■□ 3.03
UBFD1-206ENST00000566669 TBC1D9Q6ZT07 1266 aa33.96■■■■□ 3.03
UBFD1-206ENST00000566669 NOP58Q9Y2X3 529 aaKnown RBP33.96■■■■□ 3.03
UBFD1-206ENST00000566669 SURF6O75683 361 aaKnown RBP33.95■■■■□ 3.03
UBFD1-206ENST00000566669 FMNL1O95466 1100 aaPredicted RBP33.95■■■■□ 3.03
UBFD1-206ENST00000566669 DHX36Q9H2U1 1008 aaKnown RBP33.95■■■■□ 3.03
UBFD1-206ENST00000566669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.95■■■■□ 3.03
UBFD1-206ENST00000566669 HERC5Q9UII4 1024 aaKnown RBP33.95■■■■□ 3.03
UBFD1-206ENST00000566669 FCGRTP55899 365 aa33.94■■■■□ 3.02
UBFD1-206ENST00000566669 ITPRIPQ8IWB1 547 aa33.94■■■■□ 3.02
UBFD1-206ENST00000566669 BCRP11274 1271 aa33.93■■■■□ 3.02
UBFD1-206ENST00000566669 EN2P19622 333 aaPredicted RBP33.93■■■■□ 3.02
UBFD1-206ENST00000566669 NAA16Q6N069 864 aaPredicted RBP33.93■■■■□ 3.02
UBFD1-206ENST00000566669 TEX11Q8IYF3 940 aa33.93■■■■□ 3.02
UBFD1-206ENST00000566669 TRIM47Q96LD4 638 aa33.93■■■■□ 3.02
UBFD1-206ENST00000566669 TMED8Q6PL24 325 aaPredicted RBP33.92■■■■□ 3.02
UBFD1-206ENST00000566669 RAET1EQ8TD07 263 aa33.92■■■■□ 3.02
UBFD1-206ENST00000566669 ZBTB7BO15156 539 aaPredicted RBP33.91■■■■□ 3.02
UBFD1-206ENST00000566669 GADL1Q6ZQY3 521 aa33.91■■■■□ 3.02
UBFD1-206ENST00000566669 CERS3Q8IU89 383 aa33.91■■■■□ 3.02
UBFD1-206ENST00000566669 PNMA3Q9UL41 463 aa33.91■■■■□ 3.02
UBFD1-206ENST00000566669 OSBPP22059 807 aa33.9■■■■□ 3.02
UBFD1-206ENST00000566669 PPP4CP60510 307 aa33.9■■■■□ 3.02
UBFD1-206ENST00000566669 DIEXFQ68CQ4 756 aaKnown RBP33.9■■■■□ 3.02
UBFD1-206ENST00000566669 PROCA1Q8NCQ7 364 aaPredicted RBP33.9■■■■□ 3.02
UBFD1-206ENST00000566669 PI4KBQ9UBF8 816 aa33.9■■■■□ 3.02
UBFD1-206ENST00000566669 AGTPBP1Q9UPW5 1226 aa33.9■■■■□ 3.02
UBFD1-206ENST00000566669 DOCK1Q14185 1865 aa33.9■■■■□ 3.02
UBFD1-206ENST00000566669 ZBED9Q6R2W3 1325 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 MYPNQ86TC9 1320 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 CYP2C8P10632 490 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 MS4A1P11836 297 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 MIER1Q8N108 512 aa33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms