RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 LDHCP07864 332 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 YY1P25490 414 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 PTH1RQ03431 593 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 MCMDC2Q4G0Z9 681 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
SMPD3-207ENST00000566466 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
SMPD3-207ENST00000566466 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
SMPD3-207ENST00000566466 DDTLA6NHG4 134 aaPredicted RBP11.1□□□□□ -0.63
SMPD3-207ENST00000566466 CYP2D6P10635 497 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 RBM5P52756 815 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMPD3-207ENST00000566466 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
SMPD3-207ENST00000566466 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
SMPD3-207ENST00000566466 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 TMEM39BQ9GZU3 492 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
SMPD3-207ENST00000566466 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 DIAPH3Q9NSV4 1193 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 TAF6LQ9Y6J9 622 aa11.1□□□□□ -0.63
SMPD3-207ENST00000566466 CYP2D7A0A087X1C5 515 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 TCP10L2B9ZVM9 353 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 HIP1O00291 1037 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
SMPD3-207ENST00000566466 HSPD1P10809 573 aaKnown RBP11.09□□□□□ -0.63
SMPD3-207ENST00000566466 EAPPQ56P03 285 aaPredicted RBP11.09□□□□□ -0.63
SMPD3-207ENST00000566466 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 MAP1SQ66K74 1059 aaPredicted RBP11.09□□□□□ -0.63
SMPD3-207ENST00000566466 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 LDHDQ86WU2 507 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 AIDAQ96BJ3 306 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 GLIS2Q9BZE0 524 aaPredicted RBP11.09□□□□□ -0.63
SMPD3-207ENST00000566466 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
SMPD3-207ENST00000566466 ZMYM6O95789 1325 aa11.09□□□□□ -0.63
SMPD3-207ENST00000566466 LAMB1P07942 1786 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 ROBO3Q96MS0 1386 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 TRAF5O00463 557 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 ENTPD3O75355 529 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 BAG3O95817 575 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 GABPAQ06546 454 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 RASA3Q14644 834 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 PNMA8AQ86V59 439 aaPredicted RBP11.08□□□□□ -0.64
SMPD3-207ENST00000566466 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
SMPD3-207ENST00000566466 VEZTQ9HBM0 779 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 SLC4A4Q9Y6R1 1079 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
SMPD3-207ENST00000566466 LAMA4Q16363 1823 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 PLCD1P51178 756 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 MAP3K10Q02779 954 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 TCP10Q12799 353 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 PICALMQ13492 652 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 RRP1BQ14684 758 aaKnown RBP11.07□□□□□ -0.64
SMPD3-207ENST00000566466 ALX1Q15699 326 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
SMPD3-207ENST00000566466 CTR9Q6PD62 1173 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 CERS3Q8IU89 383 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 IFNL3Q8IZI9 196 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 DSCC1Q9BVC3 393 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 CRNKL1Q9BZJ0 848 aaKnown RBP11.07□□□□□ -0.64
SMPD3-207ENST00000566466 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 PALD1Q9ULE6 856 aa11.07□□□□□ -0.64
SMPD3-207ENST00000566466 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
SMPD3-207ENST00000566466 PATL2C9JE40 543 aaKnown RBP11.06□□□□□ -0.64
SMPD3-207ENST00000566466 FGAP02671 866 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 PLCG2P16885 1265 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 JAG1P78504 1218 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
SMPD3-207ENST00000566466 SLC4A8Q2Y0W8 1093 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 NBPF12Q5TAG4 269 aaPredicted RBP11.06□□□□□ -0.64
SMPD3-207ENST00000566466 GIMAP6Q6P9H5 292 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 KRT26Q7Z3Y9 468 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 USP48Q86UV5 1035 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
SMPD3-207ENST00000566466 TBC1D10CQ8IV04 446 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 MAP4K1Q92918 833 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
SMPD3-207ENST00000566466 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
SMPD3-207ENST00000566466 POLR2AP24928 1970 aaKnown RBP11.06□□□□□ -0.64
SMPD3-207ENST00000566466 OTOFQ9HC10 1997 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 USP17L21D6R901 530 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 GNAT2P19087 354 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 SBK1Q52WX2 424 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 C12orf60Q5U649 245 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 STOX1Q6ZVD7 989 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 SLC44A5Q8NCS7 719 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 CDCA5Q96FF9 252 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMPD3-207ENST00000566466 PPP2R3BQ9Y5P8 575 aa11.05□□□□□ -0.64
SMPD3-207ENST00000566466 MYH1P12882 1939 aa11.04□□□□□ -0.64
SMPD3-207ENST00000566466 MYO1BO43795 1136 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms