RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZFYP08048 801 aaPredicted RBP25.47■■□□□ 1.67
SHCBP1-205ENST00000566016 MIGA1Q8NAN2 632 aa25.47■■□□□ 1.67
SHCBP1-205ENST00000566016 MKRN1Q9UHC7 482 aaKnown RBP25.47■■□□□ 1.67
SHCBP1-205ENST00000566016 NAV1Q8NEY1 1877 aa25.46■■□□□ 1.67
SHCBP1-205ENST00000566016 TTLL12Q14166 644 aaPredicted RBP25.46■■□□□ 1.67
SHCBP1-205ENST00000566016 LDLRAD1Q5T700 205 aa25.46■■□□□ 1.67
SHCBP1-205ENST00000566016 CENPQQ7L2Z9 268 aaPredicted RBP25.46■■□□□ 1.67
SHCBP1-205ENST00000566016 TICAM2Q86XR7 235 aa25.46■■□□□ 1.67
SHCBP1-205ENST00000566016 OSBPL5Q9H0X9 879 aaPredicted RBP25.46■■□□□ 1.67
SHCBP1-205ENST00000566016 LAMB1P07942 1786 aa25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 MAGEB6P1A0A0J9YX57 407 aa25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 ECE1P42892 770 aa25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 PICALMQ13492 652 aa25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 ERICH6BQ5W0A0 696 aa25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 ZFPM1Q8IX07 1006 aa25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 ANGEL1Q9UNK9 670 aaKnown RBP25.45■■□□□ 1.66
SHCBP1-205ENST00000566016 IREB2P48200 963 aaKnown RBP25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 DYNLL1P63167 89 aaKnown RBP25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 DCAF15Q66K64 600 aa25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 RGMBQ6NW40 437 aa25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 MOB2Q70IA6 237 aa25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 SIPA1L1O43166 1804 aa25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 FLT1P17948 1338 aa25.44■■□□□ 1.66
SHCBP1-205ENST00000566016 SH3BP5LQ7L8J4 393 aa25.43■■□□□ 1.66
SHCBP1-205ENST00000566016 EVI5LQ96CN4 794 aa25.43■■□□□ 1.66
SHCBP1-205ENST00000566016 CSRNP1Q96S65 589 aa25.43■■□□□ 1.66
SHCBP1-205ENST00000566016 UBE2Q2LH0YL09 131 aa25.42■■□□□ 1.66
SHCBP1-205ENST00000566016 USP2O75604 605 aaPredicted RBP25.42■■□□□ 1.66
SHCBP1-205ENST00000566016 TGFBRAP1Q8WUH2 860 aa25.42■■□□□ 1.66
SHCBP1-205ENST00000566016 CAPNS2Q96L46 248 aa25.42■■□□□ 1.66
SHCBP1-205ENST00000566016 DHX36Q9H2U1 1008 aaKnown RBP25.42■■□□□ 1.66
SHCBP1-205ENST00000566016 VEGFBP49765 207 aa25.41■■□□□ 1.66
SHCBP1-205ENST00000566016 PRKG1Q13976 671 aa25.41■■□□□ 1.66
SHCBP1-205ENST00000566016 ZSCAN29Q8IWY8 852 aaPredicted RBP25.41■■□□□ 1.66
SHCBP1-205ENST00000566016 APPBP2Q92624 585 aa25.41■■□□□ 1.66
SHCBP1-205ENST00000566016 CCDC102AQ96A19 550 aa25.41■■□□□ 1.66
SHCBP1-205ENST00000566016 FSD1Q9BTV5 496 aa25.41■■□□□ 1.66
SHCBP1-205ENST00000566016 DDTLA6NHG4 134 aaPredicted RBP25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 RNF113AO15541 343 aaKnown RBP25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 PDE4AP27815 886 aa25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 MAP3K10Q02779 954 aa25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 CYP4F22Q6NT55 531 aa25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 JMYQ8N9B5 988 aa25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 CRNKL1Q9BZJ0 848 aaKnown RBP25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 WDR33Q9C0J8 1336 aaKnown RBP25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 ANKRD13AQ8IZ07 590 aa25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 FZD1Q9UP38 647 aa25.4■■□□□ 1.66
SHCBP1-205ENST00000566016 MBD4O95243 580 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 CHGBP05060 677 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 SLC10A3P09131 477 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 ZNF157P51786 506 aaPredicted RBP25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 SLFNL1Q499Z3 407 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 PAXIP1Q6ZW49 1069 aaPredicted RBP25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 MAPKAPK5Q8IW41 473 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 LCORLQ8N3X6 602 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 CCDC136Q96JN2 1154 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 ZNF341Q9BYN7 854 aa25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 BAZ2AQ9UIF9 1905 aaKnown RBP25.39■■□□□ 1.65
SHCBP1-205ENST00000566016 FAM155AB1AL88 458 aaPredicted RBP25.38■■□□□ 1.65
SHCBP1-205ENST00000566016 TBC1D12O60347 775 aa25.38■■□□□ 1.65
SHCBP1-205ENST00000566016 USP5P45974 858 aa25.38■■□□□ 1.65
SHCBP1-205ENST00000566016 NOGQ13253 232 aa25.38■■□□□ 1.65
SHCBP1-205ENST00000566016 AIDAQ96BJ3 306 aa25.38■■□□□ 1.65
SHCBP1-205ENST00000566016 PUS7LQ9H0K6 701 aaKnown RBP25.38■■□□□ 1.65
SHCBP1-205ENST00000566016 RASAL3Q86YV0 1011 aa25.37■■□□□ 1.65
SHCBP1-205ENST00000566016 PI4KBQ9UBF8 816 aa25.37■■□□□ 1.65
SHCBP1-205ENST00000566016 ZNF112Q9UJU3 913 aa25.37■■□□□ 1.65
SHCBP1-205ENST00000566016 DOCK1Q14185 1865 aa25.36■■□□□ 1.65
SHCBP1-205ENST00000566016 MAP2K2P36507 400 aa25.36■■□□□ 1.65
SHCBP1-205ENST00000566016 OSBP2Q969R2 916 aa25.36■■□□□ 1.65
SHCBP1-205ENST00000566016 WRNIP1Q96S55 665 aa25.36■■□□□ 1.65
SHCBP1-205ENST00000566016 ARMT1Q9H993 441 aa25.36■■□□□ 1.65
SHCBP1-205ENST00000566016 HERC5Q9UII4 1024 aaKnown RBP25.36■■□□□ 1.65
SHCBP1-205ENST00000566016 MAP3K9P80192 1104 aa25.35■■□□□ 1.65
SHCBP1-205ENST00000566016 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.35■■□□□ 1.65
SHCBP1-205ENST00000566016 MIGA2Q7L4E1 593 aa25.35■■□□□ 1.65
SHCBP1-205ENST00000566016 ATP8A2Q9NTI2 1148 aa25.35■■□□□ 1.65
SHCBP1-205ENST00000566016 ZMYM1Q5SVZ6 1142 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 METTL16Q86W50 562 aaKnown RBP25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 CSADQ9Y600 493 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 ATAD5Q96QE3 1844 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 TRIM6-TRIM34B2RNG4 842 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 VGLL4Q14135 290 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 CLMNQ96JQ2 1002 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 STRBPQ96SI9 672 aaKnown RBP25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 DCP1AQ9NPI6 582 aaPredicted RBP25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 PALD1Q9ULE6 856 aa25.34■■□□□ 1.65
SHCBP1-205ENST00000566016 PHF20L1A8MW92 1017 aa25.33■■□□□ 1.65
SHCBP1-205ENST00000566016 HLA-DOAP06340 250 aa25.33■■□□□ 1.65
SHCBP1-205ENST00000566016 TTC22Q5TAA0 569 aa25.33■■□□□ 1.65
SHCBP1-205ENST00000566016 SDR42E1Q8WUS8 393 aa25.33■■□□□ 1.65
SHCBP1-205ENST00000566016 SLC10A4Q96EP9 437 aa25.33■■□□□ 1.65
SHCBP1-205ENST00000566016 ZBTB48P10074 688 aaPredicted RBP25.32■■□□□ 1.64
SHCBP1-205ENST00000566016 GNAT2P19087 354 aa25.32■■□□□ 1.64
SHCBP1-205ENST00000566016 GRM1Q13255 1194 aa25.32■■□□□ 1.64
SHCBP1-205ENST00000566016 NOL9Q5SY16 702 aaKnown RBP25.32■■□□□ 1.64
SHCBP1-205ENST00000566016 FOXP4Q8IVH2 680 aaPredicted RBP25.32■■□□□ 1.64
SHCBP1-205ENST00000566016 EHD4Q9H223 541 aa25.32■■□□□ 1.64
SHCBP1-205ENST00000566016 TAOK2Q9UL54 1235 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms