RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
CX3CL1-204ENST00000565912 ELP1O95163 1332 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 TBC1D8BQ0IIM8 1120 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 TNNQ9UQP3 1299 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 MAP3K5Q99683 1374 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 HIBADHP31937 336 aaKnown RBP15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 STRN3Q13033 797 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 MAEAQ7L5Y9 396 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 CCDC26Q8TAB7 109 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 VPS16Q9H269 839 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 NOL3O60936 208 aaKnown RBP15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 CPA1P15085 419 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 MYL5Q02045 173 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 BRDTQ58F21 947 aaPredicted RBP15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 GPR161Q8N6U8 529 aaKnown RBP15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 NKIRAS1Q9NYS0 192 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 CHMLP26374 656 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 STIM2Q9P246 746 aa15.23■□□□□ 0.03
CX3CL1-204ENST00000565912 NOP56O00567 594 aaKnown RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 TXKP42681 527 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 TIMM10P62072 90 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 CSRNP2Q9H175 543 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 MKRN1Q9UHC7 482 aaKnown RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 ZKSCAN5Q9Y2L8 839 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 DDX39AO00148 427 aaKnown RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 RNASE9P60153 205 aaKnown RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 NBPF11Q86T75 865 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 ZMYND15Q9H091 742 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 MAPK8IP1Q9UQF2 711 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 FLT4P35916 1363 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 RNMTO43148 476 aaKnown RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 XRCC6P12956 609 aaKnown RBP eCLIP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 ITGA6P23229 1130 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 RAD50Q92878 1312 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 CLUL1Q15846 466 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 PCDH11XQ9BZA7 1347 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 PCDH11YQ9BZA8 1340 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 TUBB4BP68371 445 aa15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
CX3CL1-204ENST00000565912 NCAPH2Q6IBW4 605 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 IVNS1ABPQ9Y6Y0 642 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 A0A1B0GUL7 405 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 ARHGEF35A5YM69 484 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 HSPA1LP34931 641 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 HAUS3Q68CZ6 603 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 SOS1Q07889 1333 aaPredicted RBP15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 VAMP4O75379 141 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 PRKG1Q13976 671 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 VWA3BQ502W6 1294 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 LIN9Q5TKA1 542 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 CNNM4Q6P4Q7 775 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 CCDC110Q8TBZ0 833 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 ABCC1P33527 1531 aa15.21■□□□□ 0.03
CX3CL1-204ENST00000565912 CALUO43852 315 aaPredicted RBP15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 DEXIO95424 95 aa15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 GCP02774 474 aa15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 PPP2R5DQ14738 602 aa15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 RILPL1Q5EBL4 403 aa15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 PRDM1O75626 825 aa15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 EYA1Q99502 592 aa15.21■□□□□ 0.02
CX3CL1-204ENST00000565912 VIMP08670 466 aaKnown RBP15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 FNBP4Q8N3X1 1017 aaPredicted RBP15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 IGSF22Q8N9C0 903 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 PPP1R2P41236 205 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 INTS8Q75QN2 995 aaKnown RBP15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 RPUSD2Q8IZ73 545 aaKnown RBP15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 FAM76AQ8TAV0 307 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 C19orf44Q9H6X5 657 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 EXOC7Q9UPT5 735 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 PLEKHM2Q8IWE5 1019 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 KCNA6P17658 529 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 ASIC2Q16515 512 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 UIMC1Q96RL1 719 aa15.2■□□□□ 0.02
CX3CL1-204ENST00000565912 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 UTP14CQ5TAP6 766 aaKnown RBP15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 ZNF365Q70YC5 407 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 EYA2O00167 538 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 GABPAQ06546 454 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 TESK2Q96S53 571 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 NACA2Q9H009 215 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 PPANQ9NQ55 473 aaKnown RBP15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 HPDP32754 393 aaPredicted RBP15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 NOX5Q96PH1 765 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
CX3CL1-204ENST00000565912 CETN3O15182 167 aa15.18■□□□□ 0.02
CX3CL1-204ENST00000565912 CIB2O75838 187 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms