RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 CD99L2Q8TCZ2 262 aa19.28■□□□□ 0.68
CDH3-204ENST00000565453 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
CDH3-204ENST00000565453 AK9Q5TCS8 1911 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 DDTLA6NHG4 134 aaPredicted RBP19.27■□□□□ 0.68
CDH3-204ENST00000565453 PHF20L1A8MW92 1017 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 BTBD19C9JJ37 291 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 SP3Q02447 781 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 OS9Q13438 667 aaPredicted RBP19.27■□□□□ 0.68
CDH3-204ENST00000565453 TAF1CQ15572 869 aaPredicted RBP19.27■□□□□ 0.68
CDH3-204ENST00000565453 ZFYVE28Q9HCC9 887 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
CDH3-204ENST00000565453 KCNH4Q9UQ05 1017 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 TRIM17Q9Y577 477 aa19.27■□□□□ 0.68
CDH3-204ENST00000565453 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
CDH3-204ENST00000565453 LDHCP07864 332 aa19.26■□□□□ 0.67
CDH3-204ENST00000565453 GSTO1P78417 241 aa19.26■□□□□ 0.67
CDH3-204ENST00000565453 ZNF512BQ96KM6 892 aaPredicted RBP19.26■□□□□ 0.67
CDH3-204ENST00000565453 SLURP2P0DP57 97 aa19.25■□□□□ 0.67
CDH3-204ENST00000565453 PICALMQ13492 652 aa19.25■□□□□ 0.67
CDH3-204ENST00000565453 TTC39AQ5SRH9 613 aa19.25■□□□□ 0.67
CDH3-204ENST00000565453 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
CDH3-204ENST00000565453 SNRKQ9NRH2 765 aa19.25■□□□□ 0.67
CDH3-204ENST00000565453 RAI14Q9P0K7 980 aa19.25■□□□□ 0.67
CDH3-204ENST00000565453 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
CDH3-204ENST00000565453 MAST2Q6P0Q8 1798 aa19.24■□□□□ 0.67
CDH3-204ENST00000565453 MAP4K4O95819 1239 aaPredicted RBP19.24■□□□□ 0.67
CDH3-204ENST00000565453 MOGSQ13724 837 aa19.24■□□□□ 0.67
CDH3-204ENST00000565453 CCDC158Q5M9N0 1113 aa19.24■□□□□ 0.67
CDH3-204ENST00000565453 EAF2Q96CJ1 260 aaPredicted RBP19.24■□□□□ 0.67
CDH3-204ENST00000565453 TLR7Q9NYK1 1049 aaKnown RBP19.24■□□□□ 0.67
CDH3-204ENST00000565453 COL2A1P02458 1487 aaPredicted RBP19.23■□□□□ 0.67
CDH3-204ENST00000565453 CYP2E1P05181 493 aaPredicted RBP19.23■□□□□ 0.67
CDH3-204ENST00000565453 ZSCAN29Q8IWY8 852 aaPredicted RBP19.23■□□□□ 0.67
CDH3-204ENST00000565453 SCYL3Q8IZE3 742 aa19.23■□□□□ 0.67
CDH3-204ENST00000565453 LRP2BPQ9P2M1 347 aa19.23■□□□□ 0.67
CDH3-204ENST00000565453 PTPN22Q9Y2R2 807 aa19.23■□□□□ 0.67
CDH3-204ENST00000565453 TLR2O60603 784 aa19.22■□□□□ 0.67
CDH3-204ENST00000565453 MS4A1P11836 297 aa19.22■□□□□ 0.67
CDH3-204ENST00000565453 ANKRD23Q86SG2 305 aa19.22■□□□□ 0.67
CDH3-204ENST00000565453 CCDC8Q9H0W5 538 aaPredicted RBP19.22■□□□□ 0.67
CDH3-204ENST00000565453 EFCC1Q9HA90 598 aa19.22■□□□□ 0.67
CDH3-204ENST00000565453 CXCL11O14625 94 aa19.21■□□□□ 0.67
CDH3-204ENST00000565453 TBC1D12O60347 775 aa19.21■□□□□ 0.67
CDH3-204ENST00000565453 ZAP70P43403 619 aa19.21■□□□□ 0.67
CDH3-204ENST00000565453 OSBPL5Q9H0X9 879 aaPredicted RBP19.21■□□□□ 0.67
CDH3-204ENST00000565453 DOCK1Q14185 1865 aa19.2■□□□□ 0.66
CDH3-204ENST00000565453 IGSF3O75054 1194 aa19.2■□□□□ 0.66
CDH3-204ENST00000565453 PTPRAP18433 802 aa19.2■□□□□ 0.66
CDH3-204ENST00000565453 ADGRA1Q86SQ6 560 aa19.2■□□□□ 0.66
CDH3-204ENST00000565453 PIH1D3Q9NQM4 214 aaKnown RBP19.2■□□□□ 0.66
CDH3-204ENST00000565453 EXOC6BQ9Y2D4 811 aa19.2■□□□□ 0.66
CDH3-204ENST00000565453 ADGRA2Q96PE1 1338 aa19.2■□□□□ 0.66
CDH3-204ENST00000565453 PHIPQ8WWQ0 1821 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 CTNND1O60716 968 aaKnown RBP19.19■□□□□ 0.66
CDH3-204ENST00000565453 PPP4CP60510 307 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 NAA16Q6N069 864 aaPredicted RBP19.19■□□□□ 0.66
CDH3-204ENST00000565453 GPAT2Q6NUI2 795 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 C17orf99Q6UX52 265 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 TEX11Q8IYF3 940 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 SH3RF3Q8TEJ3 882 aaPredicted RBP19.19■□□□□ 0.66
CDH3-204ENST00000565453 PICK1Q9NRD5 415 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 COG6Q9Y2V7 657 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 AFG3L2Q9Y4W6 797 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 ZHX2Q9Y6X8 837 aa19.19■□□□□ 0.66
CDH3-204ENST00000565453 MYO5AQ9Y4I1 1855 aaKnown RBP19.19■□□□□ 0.66
CDH3-204ENST00000565453 ZSWIM8A7E2V4 1837 aa19.18■□□□□ 0.66
CDH3-204ENST00000565453 PDHXO00330 501 aa19.18■□□□□ 0.66
CDH3-204ENST00000565453 ERC1Q8IUD2 1116 aa19.18■□□□□ 0.66
CDH3-204ENST00000565453 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
CDH3-204ENST00000565453 AATFQ9NY61 560 aaKnown RBP eCLIP19.18■□□□□ 0.66
CDH3-204ENST00000565453 RCAN3Q9UKA8 241 aa19.18■□□□□ 0.66
CDH3-204ENST00000565453 DDX19BQ9UMR2 479 aa19.18■□□□□ 0.66
CDH3-204ENST00000565453 SIPA1L1O43166 1804 aa19.17■□□□□ 0.66
CDH3-204ENST00000565453 A0A0G2JLL6 359 aaPredicted RBP19.17■□□□□ 0.66
CDH3-204ENST00000565453 FAM196BA6NMK8 535 aa19.17■□□□□ 0.66
CDH3-204ENST00000565453 LACTBP83111 547 aaPredicted RBP19.17■□□□□ 0.66
CDH3-204ENST00000565453 PRRT2Q7Z6L0 340 aaPredicted RBP19.17■□□□□ 0.66
CDH3-204ENST00000565453 SIRT2Q8IXJ6 389 aa19.17■□□□□ 0.66
CDH3-204ENST00000565453 RPAP2Q8IXW5 612 aaPredicted RBP19.17■□□□□ 0.66
CDH3-204ENST00000565453 ARMC5Q96C12 935 aa19.17■□□□□ 0.66
CDH3-204ENST00000565453 ARHGAP39Q9C0H5 1083 aa19.17■□□□□ 0.66
CDH3-204ENST00000565453 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.17■□□□□ 0.66
CDH3-204ENST00000565453 CDK5RAP2Q96SN8 1893 aa19.16■□□□□ 0.66
CDH3-204ENST00000565453 BAG3O95817 575 aa19.16■□□□□ 0.66
CDH3-204ENST00000565453 ARHGEF6Q15052 776 aa19.16■□□□□ 0.66
CDH3-204ENST00000565453 AACSQ86V21 672 aa19.16■□□□□ 0.66
CDH3-204ENST00000565453 RHPN1Q8TCX5 695 aa19.16■□□□□ 0.66
CDH3-204ENST00000565453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.16■□□□□ 0.66
CDH3-204ENST00000565453 CPA4Q9UI42 421 aa19.16■□□□□ 0.66
CDH3-204ENST00000565453 PTPRFP10586 1907 aa19.15■□□□□ 0.66
CDH3-204ENST00000565453 PLCG2P16885 1265 aa19.15■□□□□ 0.66
CDH3-204ENST00000565453 RRP1BQ14684 758 aaKnown RBP19.15■□□□□ 0.66
CDH3-204ENST00000565453 HSP90AB4PQ58FF6 505 aa19.15■□□□□ 0.66
CDH3-204ENST00000565453 CCDC84Q86UT8 332 aaPredicted RBP19.15■□□□□ 0.66
CDH3-204ENST00000565453 NOL10Q9BSC4 688 aaKnown RBP19.15■□□□□ 0.66
CDH3-204ENST00000565453 PTCH2Q9Y6C5 1203 aa19.15■□□□□ 0.66
CDH3-204ENST00000565453 FOCADQ5VW36 1801 aa19.15■□□□□ 0.66
CDH3-204ENST00000565453 CTGFP29279 349 aa19.14■□□□□ 0.65
CDH3-204ENST00000565453 FASTKD5Q7L8L6 764 aaKnown RBP19.14■□□□□ 0.65
CDH3-204ENST00000565453 TGFBRAP1Q8WUH2 860 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms