RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 RASGRF1Q13972 1273 aa14.39□□□□□ -0.11
NSMCE1-209ENST00000565384 SH3BP5LQ7L8J4 393 aa14.39□□□□□ -0.11
NSMCE1-209ENST00000565384 API5Q9BZZ5 524 aaKnown RBP14.39□□□□□ -0.11
NSMCE1-209ENST00000565384 PICK1Q9NRD5 415 aa14.39□□□□□ -0.11
NSMCE1-209ENST00000565384 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
NSMCE1-209ENST00000565384 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
NSMCE1-209ENST00000565384 A0A0G2JLL6 359 aaPredicted RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 H0YGN5 161 aa14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 CT47B1P0C2W7 299 aaPredicted RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 PTPRAP18433 802 aa14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 PRRT2Q7Z6L0 340 aaPredicted RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 ZSCAN29Q8IWY8 852 aaPredicted RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 TRMT2AQ8IZ69 625 aaKnown RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 NKX2-3Q8TAU0 364 aa14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 MEIS3Q99687 375 aa14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 ABCF2Q9UG63 623 aa14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 PDS5AQ29RF7 1337 aaKnown RBP14.38□□□□□ -0.11
NSMCE1-209ENST00000565384 DDTLA6NHG4 134 aaPredicted RBP14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 CCL5P13501 91 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 BTDP43251 543 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 GJA8P48165 433 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 TIMM10P62072 90 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 UBXN2AP68543 259 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 PICALMQ13492 652 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 GADL1Q6ZQY3 521 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 DDX4Q9NQI0 724 aaKnown RBP14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 AFG3L2Q9Y4W6 797 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 MROH7-TTC4A0A0A0MT08 1334 aa14.37□□□□□ -0.11
NSMCE1-209ENST00000565384 DOCK1Q14185 1865 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 A0A1B0GUL7 405 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 GJB1P08034 283 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 MAP3K10Q02779 954 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 XAGE2Q96GT9 111 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 RNF208Q9H0X6 261 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 GABRQQ9UN88 632 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
NSMCE1-209ENST00000565384 MGAMO43451 1857 aa14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 CTNND1O60716 968 aaKnown RBP14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 TFCP2Q12800 502 aa14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 MVPQ14764 893 aaKnown RBP14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 SPTY2D1Q68D10 685 aaPredicted RBP14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 DPF3Q92784 378 aa14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 AKAP2Q9Y2D5 859 aa14.35□□□□□ -0.11
NSMCE1-209ENST00000565384 TRIM75PA6NK02 468 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 SRGAP3O43295 1099 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 RHBDL3P58872 404 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 MECOMQ03112 1051 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 UBE2Q1Q7Z7E8 422 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 CCDC84Q86UT8 332 aaPredicted RBP14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 SMCR8Q8TEV9 937 aaPredicted RBP14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 UNC93B1Q9H1C4 597 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
NSMCE1-209ENST00000565384 PTPRFP10586 1907 aa14.33□□□□□ -0.11
NSMCE1-209ENST00000565384 GPR75-ASB3A0A0A6YYF3 556 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 TNPO2O14787 897 aaKnown RBP14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 ADCY3O60266 1144 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 GNAI3P08754 354 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 FLT3LGP49771 235 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 MTX1Q13505 466 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 U2AF1L4Q8WU68 220 aaKnown RBP14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 NEUROD6Q96NK8 337 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 HTATIP2Q9BUP3 242 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 AGTPBP1Q9UPW5 1226 aa14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
NSMCE1-209ENST00000565384 TBC1D12O60347 775 aa14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 FARP2O94887 1054 aaPredicted RBP14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 INHAP05111 366 aa14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 RARSP54136 660 aaKnown RBP14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 HMG20BQ9P0W2 317 aa14.32□□□□□ -0.12
NSMCE1-209ENST00000565384 FAM196BA6NMK8 535 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 SGPL1O95470 568 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 ELNP15502 786 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 GSTO1P78417 241 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 IRF5Q13568 498 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 TREML2Q5T2D2 321 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 PI16Q6UXB8 463 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 ANKRD13CQ8N6S4 541 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 SPATA5Q8NB90 893 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 PXYLP1Q8TE99 480 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 NSUN4Q96CB9 384 aaKnown RBP14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 OSBPL5Q9H0X9 879 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 RBM27Q9P2N5 1060 aaKnown RBP14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 PNMA3Q9UL41 463 aa14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-209ENST00000565384 MAP4K4O95819 1239 aaPredicted RBP14.3□□□□□ -0.12
NSMCE1-209ENST00000565384 LDHCP07864 332 aa14.3□□□□□ -0.12
NSMCE1-209ENST00000565384 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms