RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PPP1R12BO60237 982 aaPredicted RBP31.37■■■□□ 2.61
NME3-208ENST00000565379 LDHCP07864 332 aa31.37■■■□□ 2.61
NME3-208ENST00000565379 ZSCAN25Q6NSZ9 544 aa31.37■■■□□ 2.61
NME3-208ENST00000565379 IDH1O75874 414 aaKnown RBP31.36■■■□□ 2.61
NME3-208ENST00000565379 GJA5P36382 358 aa31.36■■■□□ 2.61
NME3-208ENST00000565379 TNFAIP1Q13829 316 aa31.36■■■□□ 2.61
NME3-208ENST00000565379 KBTBD3Q8NAB2 608 aa31.36■■■□□ 2.61
NME3-208ENST00000565379 NSUN4Q96CB9 384 aaKnown RBP31.36■■■□□ 2.61
NME3-208ENST00000565379 FAM163AQ96GL9 167 aaPredicted RBP31.36■■■□□ 2.61
NME3-208ENST00000565379 MECOMQ03112 1051 aa31.35■■■□□ 2.61
NME3-208ENST00000565379 SLC10A4Q96EP9 437 aa31.35■■■□□ 2.61
NME3-208ENST00000565379 WNK4Q96J92 1243 aa31.35■■■□□ 2.61
NME3-208ENST00000565379 TBC1D8O95759 1140 aa31.34■■■□□ 2.61
NME3-208ENST00000565379 TTC22Q5TAA0 569 aa31.34■■■□□ 2.61
NME3-208ENST00000565379 NAA16Q6N069 864 aaPredicted RBP31.34■■■□□ 2.61
NME3-208ENST00000565379 DAGLAQ9Y4D2 1042 aa31.34■■■□□ 2.61
NME3-208ENST00000565379 TM4SF4P48230 202 aa31.33■■■□□ 2.61
NME3-208ENST00000565379 EDC3Q96F86 508 aaKnown RBP31.33■■■□□ 2.61
NME3-208ENST00000565379 R3HDMLQ9H3Y0 253 aa31.33■■■□□ 2.61
NME3-208ENST00000565379 ZFYP08048 801 aaPredicted RBP31.32■■■□□ 2.6
NME3-208ENST00000565379 CTU1Q7Z7A3 348 aaKnown RBP31.32■■■□□ 2.6
NME3-208ENST00000565379 TRIM6-TRIM34B2RNG4 842 aa31.31■■■□□ 2.6
NME3-208ENST00000565379 IREB2P48200 963 aaKnown RBP31.31■■■□□ 2.6
NME3-208ENST00000565379 SLC9C2Q5TAH2 1124 aa31.31■■■□□ 2.6
NME3-208ENST00000565379 CNKSR2Q8WXI2 1034 aa31.31■■■□□ 2.6
NME3-208ENST00000565379 GAKO14976 1311 aa31.3■■■□□ 2.6
NME3-208ENST00000565379 CERS3Q8IU89 383 aa31.3■■■□□ 2.6
NME3-208ENST00000565379 FSD1Q9BTV5 496 aa31.3■■■□□ 2.6
NME3-208ENST00000565379 ELP3Q9H9T3 547 aa31.3■■■□□ 2.6
NME3-208ENST00000565379 DOCK2Q92608 1830 aa31.3■■■□□ 2.6
NME3-208ENST00000565379 MROH7-TTC4A0A0A0MT08 1334 aa31.29■■■□□ 2.6
NME3-208ENST00000565379 MAP4K4O95819 1239 aaPredicted RBP31.29■■■□□ 2.6
NME3-208ENST00000565379 TNNI2P48788 182 aa31.29■■■□□ 2.6
NME3-208ENST00000565379 RGS3P49796 1198 aa31.29■■■□□ 2.6
NME3-208ENST00000565379 UBE3CQ15386 1083 aa31.29■■■□□ 2.6
NME3-208ENST00000565379 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.29■■■□□ 2.6
NME3-208ENST00000565379 MAGEB6Q8N7X4 407 aa31.29■■■□□ 2.6
NME3-208ENST00000565379 RFX7Q2KHR2 1363 aa31.29■■■□□ 2.6
NME3-208ENST00000565379 MAST2Q6P0Q8 1798 aa31.28■■■□□ 2.6
NME3-208ENST00000565379 PDE6AP16499 860 aa31.28■■■□□ 2.6
NME3-208ENST00000565379 CDC42EP5Q6NZY7 148 aa31.28■■■□□ 2.6
NME3-208ENST00000565379 NOL10Q9BSC4 688 aaKnown RBP31.28■■■□□ 2.6
NME3-208ENST00000565379 BAG3O95817 575 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 CYP7A1P22680 504 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 ADD2P35612 726 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 SREBF2Q12772 1141 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 NFIAQ12857 509 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 ANKRD13AQ8IZ07 590 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 ZNF384Q8TF68 577 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 RILPL2Q969X0 211 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 TMOD2Q9NZR1 351 aa31.27■■■□□ 2.6
NME3-208ENST00000565379 GPR75-ASB3A0A0A6YYF3 556 aa31.26■■■□□ 2.59
NME3-208ENST00000565379 IGF2BP3O00425 579 aaKnown RBP eCLIP31.26■■■□□ 2.59
NME3-208ENST00000565379 RNF113AO15541 343 aaKnown RBP31.25■■■□□ 2.59
NME3-208ENST00000565379 GSPT1P15170 499 aaKnown RBP31.25■■■□□ 2.59
NME3-208ENST00000565379 VGLL4Q14135 290 aa31.25■■■□□ 2.59
NME3-208ENST00000565379 BMP2KLQ5H9B9 411 aa31.25■■■□□ 2.59
NME3-208ENST00000565379 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.25■■■□□ 2.592e-7■■■■□ 21.2
NME3-208ENST00000565379 HIP1O00291 1037 aa31.24■■■□□ 2.59
NME3-208ENST00000565379 ZBTB48P10074 688 aaPredicted RBP31.24■■■□□ 2.59
NME3-208ENST00000565379 PLCG2P16885 1265 aa31.24■■■□□ 2.59
NME3-208ENST00000565379 TCP10Q12799 353 aa31.24■■■□□ 2.59
NME3-208ENST00000565379 PKN2Q16513 984 aaKnown RBP31.24■■■□□ 2.59
NME3-208ENST00000565379 NOM1Q5C9Z4 860 aaKnown RBP31.24■■■□□ 2.59
NME3-208ENST00000565379 FAM83AQ86UY5 434 aa31.24■■■□□ 2.59
NME3-208ENST00000565379 ZNF296Q8WUU4 475 aaPredicted RBP31.24■■■□□ 2.59
NME3-208ENST00000565379 ZNF532Q9HCE3 1301 aa31.24■■■□□ 2.59
NME3-208ENST00000565379 TCRBV5S4A2TA0A5A2 114 aa31.23■■■□□ 2.59
NME3-208ENST00000565379 MANSC4A6NHS7 340 aaPredicted RBP31.23■■■□□ 2.59
NME3-208ENST00000565379 PPP4CP60510 307 aa31.23■■■□□ 2.59
NME3-208ENST00000565379 FKBP1CQ5VVH2 108 aa31.23■■■□□ 2.59
NME3-208ENST00000565379 IFNL1Q8IU54 200 aa31.23■■■□□ 2.59
NME3-208ENST00000565379 OPTNQ96CV9 577 aa31.23■■■□□ 2.59
NME3-208ENST00000565379 MYH2Q9UKX2 1941 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 SDSP20132 328 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 BTDP43251 543 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 ZFPM1Q8IX07 1006 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 USP40Q9NVE5 1235 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 FAM198AQ9UFP1 575 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 LAMB1P07942 1786 aa31.22■■■□□ 2.59
NME3-208ENST00000565379 UNCXA6NJT0 531 aa31.21■■■□□ 2.59
NME3-208ENST00000565379 MAP3K9P80192 1104 aa31.21■■■□□ 2.59
NME3-208ENST00000565379 MIGA2Q7L4E1 593 aa31.21■■■□□ 2.59
NME3-208ENST00000565379 SKAP1Q86WV1 359 aa31.21■■■□□ 2.59
NME3-208ENST00000565379 APPBP2Q92624 585 aa31.21■■■□□ 2.59
NME3-208ENST00000565379 GPR25O00155 361 aa31.2■■■□□ 2.59
NME3-208ENST00000565379 PTPN18Q99952 460 aa31.2■■■□□ 2.59
NME3-208ENST00000565379 CFHR5Q9BXR6 569 aa31.2■■■□□ 2.59
NME3-208ENST00000565379 RPAP1Q9BWH6 1393 aaPredicted RBP31.19■■■□□ 2.58
NME3-208ENST00000565379 MYO5AQ9Y4I1 1855 aaKnown RBP31.19■■■□□ 2.58
NME3-208ENST00000565379 ZKSCAN4Q969J2 545 aaPredicted RBP31.19■■■□□ 2.58
NME3-208ENST00000565379 SNCAIPQ9Y6H5 919 aa31.19■■■□□ 2.58
NME3-208ENST00000565379 MAGEB6P1A0A0J9YX57 407 aa31.18■■■□□ 2.58
NME3-208ENST00000565379 SOX10P56693 466 aa31.18■■■□□ 2.58
NME3-208ENST00000565379 INHBEP58166 350 aa31.18■■■□□ 2.58
NME3-208ENST00000565379 ADGRA1Q86SQ6 560 aa31.18■■■□□ 2.58
NME3-208ENST00000565379 FAM151AQ8WW52 585 aa31.18■■■□□ 2.58
NME3-208ENST00000565379 WRNIP1Q96S55 665 aa31.18■■■□□ 2.58
NME3-208ENST00000565379 OTUD5Q96G74 571 aa31.17■■■□□ 2.58
NME3-208ENST00000565379 MS4A4AQ96JQ5 239 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms