RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 NPM3O75607 178 aaKnown RBP22.57■■□□□ 1.2
PKD1-229ENST00000564890 PDE6AP16499 860 aa22.57■■□□□ 1.2
PKD1-229ENST00000564890 DYNLL1P63167 89 aaKnown RBP22.57■■□□□ 1.2
PKD1-229ENST00000564890 KIF23Q02241 960 aaPredicted RBP22.57■■□□□ 1.2
PKD1-229ENST00000564890 SLC9C2Q5TAH2 1124 aa22.57■■□□□ 1.2
PKD1-229ENST00000564890 MIGA2Q7L4E1 593 aa22.57■■□□□ 1.2
PKD1-229ENST00000564890 SH3BP5LQ7L8J4 393 aa22.57■■□□□ 1.2
PKD1-229ENST00000564890 ANKRD13AQ8IZ07 590 aa22.57■■□□□ 1.2
PKD1-229ENST00000564890 MIGA1Q8NAN2 632 aa22.57■■□□□ 1.2
PKD1-229ENST00000564890 SMC5Q8IY18 1101 aa22.56■■□□□ 1.2
PKD1-229ENST00000564890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.56■■□□□ 1.2
PKD1-229ENST00000564890 AIDAQ96BJ3 306 aa22.56■■□□□ 1.2
PKD1-229ENST00000564890 CSRNP1Q96S65 589 aa22.56■■□□□ 1.2
PKD1-229ENST00000564890 TTC41PQ6P2S7 1318 aa22.56■■□□□ 1.2
PKD1-229ENST00000564890 PCNTO95613 3336 aa22.55■■□□□ 1.2
PKD1-229ENST00000564890 DDTLA6NHG4 134 aaPredicted RBP22.55■■□□□ 1.2
PKD1-229ENST00000564890 MAP3K9P80192 1104 aa22.55■■□□□ 1.2
PKD1-229ENST00000564890 MKRN3Q13064 507 aaKnown RBP22.55■■□□□ 1.2
PKD1-229ENST00000564890 WRNIP1Q96S55 665 aa22.55■■□□□ 1.2
PKD1-229ENST00000564890 ZNF341Q9BYN7 854 aa22.55■■□□□ 1.2
PKD1-229ENST00000564890 OSBPL5Q9H0X9 879 aaPredicted RBP22.55■■□□□ 1.2
PKD1-229ENST00000564890 OTOFQ9HC10 1997 aa22.55■■□□□ 1.2
PKD1-229ENST00000564890 ERC2O15083 957 aa22.54■■□□□ 1.2
PKD1-229ENST00000564890 MX1P20591 662 aa22.54■■□□□ 1.2
PKD1-229ENST00000564890 SPRYD7Q5W111 196 aa22.54■■□□□ 1.2
PKD1-229ENST00000564890 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.54■■□□□ 1.2
PKD1-229ENST00000564890 TGFBRAP1Q8WUH2 860 aa22.54■■□□□ 1.2
PKD1-229ENST00000564890 BEGAINQ9BUH8 593 aa22.54■■□□□ 1.2
PKD1-229ENST00000564890 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.54■■□□□ 1.21e-6■■■□□ 18.2
PKD1-229ENST00000564890 ZNF532Q9HCE3 1301 aa22.54■■□□□ 1.2
PKD1-229ENST00000564890 TCRBV5S4A2TA0A5A2 114 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 VGLL4Q14135 290 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 CERS3Q8IU89 383 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 MAPKAPK5Q8IW41 473 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 ELP3Q9H9T3 547 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 CSADQ9Y600 493 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 SALL3Q9BXA9 1300 aa22.53■■□□□ 1.2
PKD1-229ENST00000564890 ATRNL1Q5VV63 1379 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 MAGEB6P1A0A0J9YX57 407 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 FOXN1O15353 648 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 ADD2P35612 726 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 PI4K2BQ8TCG2 481 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 WNK4Q96J92 1243 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
PKD1-229ENST00000564890 COL2A1P02458 1487 aaPredicted RBP22.52■■□□□ 1.2
PKD1-229ENST00000564890 GLRX3O76003 335 aaKnown RBP22.51■■□□□ 1.19
PKD1-229ENST00000564890 ZKSCAN4Q969J2 545 aaPredicted RBP22.51■■□□□ 1.19
PKD1-229ENST00000564890 FLT1P17948 1338 aa22.51■■□□□ 1.19
PKD1-229ENST00000564890 ZBTB48P10074 688 aaPredicted RBP22.5■■□□□ 1.19
PKD1-229ENST00000564890 INPP5BP32019 993 aa22.5■■□□□ 1.19
PKD1-229ENST00000564890 SLFNL1Q499Z3 407 aa22.5■■□□□ 1.19
PKD1-229ENST00000564890 REM2Q8IYK8 340 aaPredicted RBP22.5■■□□□ 1.19
PKD1-229ENST00000564890 RIOK1Q9BRS2 568 aaKnown RBP22.5■■□□□ 1.19
PKD1-229ENST00000564890 ZNF112Q9UJU3 913 aa22.5■■□□□ 1.19
PKD1-229ENST00000564890 CDK5RAP2Q96SN8 1893 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 GJA5P36382 358 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 USP5P45974 858 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 NUCB1Q02818 461 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 ZSCAN25Q6NSZ9 544 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 KBTBD3Q8NAB2 608 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 OPTNQ96CV9 577 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 SNCAIPQ9Y6H5 919 aa22.49■■□□□ 1.19
PKD1-229ENST00000564890 FOCADQ5VW36 1801 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 CHGBP05060 677 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 SLURP2P0DP57 97 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 MAP3K10Q02779 954 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 UBE3CQ15386 1083 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 CNKSR2Q8WXI2 1034 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 DHX36Q9H2U1 1008 aaKnown RBP22.48■■□□□ 1.19
PKD1-229ENST00000564890 STAP2Q9UGK3 403 aa22.48■■□□□ 1.19
PKD1-229ENST00000564890 SAP30BPQ9UHR5 308 aaKnown RBP22.48■■□□□ 1.19
PKD1-229ENST00000564890 MYH7P12883 1935 aa22.47■■□□□ 1.19
PKD1-229ENST00000564890 CTCFP49711 727 aaPredicted RBP22.47■■□□□ 1.19
PKD1-229ENST00000564890 PDE1AP54750 535 aa22.47■■□□□ 1.19
PKD1-229ENST00000564890 CRNKL1Q9BZJ0 848 aaKnown RBP22.47■■□□□ 1.19
PKD1-229ENST00000564890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.47■■□□□ 1.19
PKD1-229ENST00000564890 PALD1Q9ULE6 856 aa22.47■■□□□ 1.19
PKD1-229ENST00000564890 MANSC4A6NHS7 340 aaPredicted RBP22.46■■□□□ 1.19
PKD1-229ENST00000564890 SPDYE5A6NIY4 337 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 FAM196BA6NMK8 535 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 PHF20L1A8MW92 1017 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 CA12O43570 354 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 TBC1D12O60347 775 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 SREBF2Q12772 1141 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 LCORLQ8N3X6 602 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 OTUD5Q96G74 571 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 ARMT1Q9H993 441 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 PI4KBQ9UBF8 816 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 TSKSQ9UJT2 592 aa22.46■■□□□ 1.19
PKD1-229ENST00000564890 MBD4O95243 580 aa22.45■■□□□ 1.18
PKD1-229ENST00000564890 HSPA8P11142 646 aaKnown RBP22.45■■□□□ 1.18
PKD1-229ENST00000564890 TM4SF4P48230 202 aa22.45■■□□□ 1.18
PKD1-229ENST00000564890 NOL9Q5SY16 702 aaKnown RBP22.45■■□□□ 1.18
PKD1-229ENST00000564890 ERO1BQ86YB8 467 aa22.45■■□□□ 1.18
PKD1-229ENST00000564890 SLC4A8Q2Y0W8 1093 aa22.44■■□□□ 1.18
PKD1-229ENST00000564890 RNF186Q9NXI6 227 aa22.44■■□□□ 1.18
PKD1-229ENST00000564890 RNF113AO15541 343 aaKnown RBP22.43■■□□□ 1.18
PKD1-229ENST00000564890 HLA-DOAP06340 250 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms