RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 PHF20L1A8MW92 1017 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 IPO8O15397 1037 aaKnown RBP17.58■□□□□ 0.4
COMMD4-211ENST00000564815 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-211ENST00000564815 CAPN2P17655 700 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 PTPRAP18433 802 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 GSTO1P78417 241 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 GADL1Q6ZQY3 521 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 ZFPM1Q8IX07 1006 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 SLC45A1Q9Y2W3 748 aa17.58■□□□□ 0.4
COMMD4-211ENST00000564815 GAKO14976 1311 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-211ENST00000564815 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 GJB1P08034 283 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 ADORA1P30542 326 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 MAP3K10Q02779 954 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 MOGSQ13724 837 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 GPAT2Q6NUI2 795 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-211ENST00000564815 XAGE2Q96GT9 111 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 NEUROD6Q96NK8 337 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 HTATIP2Q9BUP3 242 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 RNF208Q9H0X6 261 aa17.57■□□□□ 0.4
COMMD4-211ENST00000564815 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 CYP2C8P10632 490 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 BCRP11274 1271 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 BTDP43251 543 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 RASGRF1Q13972 1273 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 MTFR1Q15390 333 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 SMCR8Q8TEV9 937 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-211ENST00000564815 AFG3L2Q9Y4W6 797 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 MYH13Q9UKX3 1938 aa17.56■□□□□ 0.4
COMMD4-211ENST00000564815 HTTP42858 3142 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 ADGRA2Q96PE1 1338 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 H0YGN5 161 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 TBC1D12O60347 775 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
COMMD4-211ENST00000564815 CCL5P13501 91 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 GJA8P48165 433 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 G3BP1Q13283 466 aaKnown RBP eCLIP17.55■□□□□ 0.42e-6■□□□□ 9.5
COMMD4-211ENST00000564815 PICALMQ13492 652 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 MEIS3Q99687 375 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 PNMA3Q9UL41 463 aa17.55■□□□□ 0.4
COMMD4-211ENST00000564815 COLQQ9Y215 455 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-211ENST00000564815 MROH7-TTC4A0A0A0MT08 1334 aa17.54■□□□□ 0.4
COMMD4-211ENST00000564815 GPR75-ASB3A0A0A6YYF3 556 aa17.54■□□□□ 0.4
COMMD4-211ENST00000564815 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-211ENST00000564815 CTGFP29279 349 aa17.54■□□□□ 0.4
COMMD4-211ENST00000564815 RARSP54136 660 aaKnown RBP17.54■□□□□ 0.4
COMMD4-211ENST00000564815 TFCP2Q12800 502 aa17.54■□□□□ 0.4
COMMD4-211ENST00000564815 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
COMMD4-211ENST00000564815 TBC1D2Q9BYX2 928 aa17.54■□□□□ 0.4
COMMD4-211ENST00000564815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.4
COMMD4-211ENST00000564815 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
COMMD4-211ENST00000564815 TNPO2O14787 897 aaKnown RBP17.53■□□□□ 0.4
COMMD4-211ENST00000564815 MECOMQ03112 1051 aa17.53■□□□□ 0.4
COMMD4-211ENST00000564815 PRKCZQ05513 592 aa17.53■□□□□ 0.4
COMMD4-211ENST00000564815 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.42e-10■■□□□ 11.8
COMMD4-211ENST00000564815 COA7Q96BR5 231 aa17.53■□□□□ 0.4
COMMD4-211ENST00000564815 CENPFP49454 3210 aa17.53■□□□□ 0.4
COMMD4-211ENST00000564815 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 ADCY3O60266 1144 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 GNAI2P04899 355 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 UQCRFS1P1P0C7P4 283 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 FXR1P51114 621 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-211ENST00000564815 MTX1Q13505 466 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 SH3BP5LQ7L8J4 393 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 SPATA5Q8NB90 893 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 PXYLP1Q8TE99 480 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 OSBPL5Q9H0X9 879 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-211ENST00000564815 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
COMMD4-211ENST00000564815 MYH2Q9UKX2 1941 aa17.51■□□□□ 0.39
COMMD4-211ENST00000564815 MKI67P46013 3256 aaKnown RBP17.51■□□□□ 0.39
COMMD4-211ENST00000564815 FLT3LGP49771 235 aa17.51■□□□□ 0.39
COMMD4-211ENST00000564815 DDX4Q9NQI0 724 aaKnown RBP17.51■□□□□ 0.39
COMMD4-211ENST00000564815 LRP2BPQ9P2M1 347 aa17.51■□□□□ 0.39
COMMD4-211ENST00000564815 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
COMMD4-211ENST00000564815 SGPL1O95470 568 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 BAG3O95817 575 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
COMMD4-211ENST00000564815 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-211ENST00000564815 IRF5Q13568 498 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 PROCA1Q8NCQ7 364 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-211ENST00000564815 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
COMMD4-211ENST00000564815 AS3MTQ9HBK9 375 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 HMG20BQ9P0W2 317 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 ATRNL1Q5VV63 1379 aa17.5■□□□□ 0.39
COMMD4-211ENST00000564815 PLCG2P16885 1265 aa17.49■□□□□ 0.39
COMMD4-211ENST00000564815 RHBDL3P58872 404 aa17.49■□□□□ 0.39
COMMD4-211ENST00000564815 SPP2Q13103 211 aa17.49■□□□□ 0.39
COMMD4-211ENST00000564815 ZNF280CQ8ND82 737 aa17.49■□□□□ 0.39
COMMD4-211ENST00000564815 NSUN4Q96CB9 384 aaKnown RBP17.49■□□□□ 0.39
COMMD4-211ENST00000564815 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
COMMD4-211ENST00000564815 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
COMMD4-211ENST00000564815 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
COMMD4-211ENST00000564815 FARP2O94887 1054 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-211ENST00000564815 CCDC158Q5M9N0 1113 aa17.48■□□□□ 0.39
COMMD4-211ENST00000564815 TEX11Q8IYF3 940 aa17.48■□□□□ 0.39
COMMD4-211ENST00000564815 ANKRD13CQ8N6S4 541 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms