RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 LRRN4CLQ8ND94 238 aa5.75□□□□□ -1.49
SCAPER-213ENST00000564757 NETO1Q8TDF5 533 aa5.75□□□□□ -1.49
SCAPER-213ENST00000564757 SLC38A3Q99624 504 aa5.75□□□□□ -1.49
SCAPER-213ENST00000564757 CORO1BQ9BR76 489 aa5.75□□□□□ -1.49
SCAPER-213ENST00000564757 TRIM56Q9BRZ2 755 aaKnown RBP5.75□□□□□ -1.49
SCAPER-213ENST00000564757 POLR3DP05423 398 aaPredicted RBP5.74□□□□□ -1.49
SCAPER-213ENST00000564757 GRIA4P48058 902 aa5.74□□□□□ -1.49
SCAPER-213ENST00000564757 EHHADHQ08426 723 aa5.74□□□□□ -1.49
SCAPER-213ENST00000564757 SPRED3Q2MJR0 410 aa5.74□□□□□ -1.49
SCAPER-213ENST00000564757 WDR18Q9BV38 432 aa5.74□□□□□ -1.49
SCAPER-213ENST00000564757 NIF3L1Q9GZT8 377 aa5.74□□□□□ -1.49
SCAPER-213ENST00000564757 ZFYVE1Q9HBF4 777 aa5.74□□□□□ -1.49
SCAPER-213ENST00000564757 AOC2O75106 756 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 FAM87AP0C7U9 286 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 TCF3P15923 654 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 CDK5R2Q13319 367 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 CCNJLQ8IV13 435 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 PI4K2BQ8TCG2 481 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 LIN7BQ9HAP6 207 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 ZFYVE28Q9HCC9 887 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 USP35Q9P2H5 1018 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 U3KQE9 123 aa5.73□□□□□ -1.49
SCAPER-213ENST00000564757 PNMA6FA0A0J9YX94 578 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 NEFLP07196 543 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 PRKCQQ04759 706 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 FMR1Q06787 632 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCAPER-213ENST00000564757 MESP2Q0VG99 397 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 PDE3AQ14432 1141 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 FAM84AQ96KN4 292 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 TCF12Q99081 682 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 VAV3Q9UKW4 847 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 PPP1R9AQ9ULJ8 1098 aa5.72□□□□□ -1.49
SCAPER-213ENST00000564757 A0A1W2PP55 124 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 GPR182O15218 404 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 TMPRSS2O15393 492 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 PRPF40AO75400 957 aaKnown RBP5.71□□□□□ -1.5
SCAPER-213ENST00000564757 B3GALT4O96024 378 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 PSMD2Q13200 908 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 FAM129BQ96TA1 746 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 DUSP9Q99956 384 aaKnown RBP5.71□□□□□ -1.5
SCAPER-213ENST00000564757 VTI1BQ9UEU0 232 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
SCAPER-213ENST00000564757 LRRC10BA6NIK2 292 aa5.7□□□□□ -1.5
SCAPER-213ENST00000564757 ZNF865P0CJ78 1059 aaPredicted RBP5.7□□□□□ -1.5
SCAPER-213ENST00000564757 DSC3Q14574 896 aa5.7□□□□□ -1.5
SCAPER-213ENST00000564757 IFI16Q16666 785 aaKnown RBP5.7□□□□□ -1.5
SCAPER-213ENST00000564757 AOC3Q16853 763 aa5.7□□□□□ -1.5
SCAPER-213ENST00000564757 ALG1LQ6GMV1 187 aa5.7□□□□□ -1.5
SCAPER-213ENST00000564757 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
SCAPER-213ENST00000564757 ALKBH8Q96BT7 664 aaKnown RBP5.7□□□□□ -1.5
SCAPER-213ENST00000564757 FAM161BQ96MY7 647 aa5.7□□□□□ -1.5
SCAPER-213ENST00000564757 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
SCAPER-213ENST00000564757 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCAPER-213ENST00000564757 CEACAM5P06731 702 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 VAMP1P23763 118 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 ARHGAP27Q6ZUM4 889 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 CILP2Q8IUL8 1156 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 GALNT12Q8IXK2 581 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 GJD3Q8N144 294 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 HRASLS5Q96KN8 279 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 PIDD1Q9HB75 910 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 WWC3Q9ULE0 1092 aa5.69□□□□□ -1.5
SCAPER-213ENST00000564757 SORBS3O60504 671 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 LEFTY1O75610 366 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 RECKO95980 971 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 LIG1P18858 919 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 MLANAQ16655 118 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 ANGEL2Q5VTE6 544 aaKnown RBP5.68□□□□□ -1.5
SCAPER-213ENST00000564757 ZSWIM9Q86XI8 627 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 TMEM87AQ8NBN3 555 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 FLAD1Q8NFF5 587 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 BHLHE22Q8NFJ8 381 aaPredicted RBP5.68□□□□□ -1.5
SCAPER-213ENST00000564757 WDR89Q96FK6 387 aaPredicted RBP5.68□□□□□ -1.5
SCAPER-213ENST00000564757 FANCD2OSQ96PS1 177 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 CSRNP1Q96S65 589 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 CRIM1Q9NZV1 1036 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 SYNGAP1Q96PV0 1343 aa5.68□□□□□ -1.5
SCAPER-213ENST00000564757 OXCT1P55809 520 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 AP3B2Q13367 1082 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 ORC1Q13415 861 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 ENOX2Q16206 610 aaKnown RBP5.67□□□□□ -1.5
SCAPER-213ENST00000564757 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 SETDB2Q96T68 719 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 BACH2Q9BYV9 841 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 ATXN3LQ9H3M9 355 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 MKNK2Q9HBH9 465 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 PRDM7Q9NQW5 492 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 PLAGL2Q9UPG8 496 aa5.67□□□□□ -1.5
SCAPER-213ENST00000564757 TMEM265A0A087WTH1 108 aa5.66□□□□□ -1.5
SCAPER-213ENST00000564757 ZNF503-AS2A6NEH8 195 aa5.66□□□□□ -1.5
SCAPER-213ENST00000564757 EIF1AYO14602 144 aaKnown RBP5.66□□□□□ -1.5
SCAPER-213ENST00000564757 SCAMP3O14828 347 aaKnown RBP5.66□□□□□ -1.5
SCAPER-213ENST00000564757 IGSF3O75054 1194 aa5.66□□□□□ -1.5
SCAPER-213ENST00000564757 CPNE3O75131 537 aaKnown RBP5.66□□□□□ -1.5
SCAPER-213ENST00000564757 ITIH2P19823 946 aa5.66□□□□□ -1.5
SCAPER-213ENST00000564757 ITPKAP23677 461 aa5.66□□□□□ -1.5
SCAPER-213ENST00000564757 CFPP27918 469 aa5.66□□□□□ -1.5
SCAPER-213ENST00000564757 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms