RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 TRIM29Q14134 588 aa25.87■■□□□ 1.73
SPSB3-206ENST00000564709 MAP7D2Q96T17 732 aa25.87■■□□□ 1.73
SPSB3-206ENST00000564709 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
SPSB3-206ENST00000564709 CHRNDQ07001 517 aa25.87■■□□□ 1.73
SPSB3-206ENST00000564709 CLIC6Q96NY7 704 aa25.87■■□□□ 1.73
SPSB3-206ENST00000564709 LRP2BPQ9P2M1 347 aa25.87■■□□□ 1.73
SPSB3-206ENST00000564709 GUCY1A2P33402 732 aa25.86■■□□□ 1.73
SPSB3-206ENST00000564709 PTPAQ15257 358 aa25.86■■□□□ 1.73
SPSB3-206ENST00000564709 SHC4Q6S5L8 630 aa25.86■■□□□ 1.73
SPSB3-206ENST00000564709 LIFRP42702 1097 aa25.86■■□□□ 1.73
SPSB3-206ENST00000564709 SSRP1Q08945 709 aaKnown RBP25.86■■□□□ 1.73
SPSB3-206ENST00000564709 CMTR1Q8N1G2 835 aaKnown RBP25.86■■□□□ 1.73
SPSB3-206ENST00000564709 CCDC82Q8N4S0 544 aa25.86■■□□□ 1.73
SPSB3-206ENST00000564709 MARCH10Q8NA82 808 aaPredicted RBP25.86■■□□□ 1.73
SPSB3-206ENST00000564709 MAP3K14Q99558 947 aa25.86■■□□□ 1.73
SPSB3-206ENST00000564709 SYKP43405 635 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 TPD52L1Q16890 204 aaPredicted RBP25.85■■□□□ 1.73
SPSB3-206ENST00000564709 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.85■■□□□ 1.73
SPSB3-206ENST00000564709 CNNM2Q9H8M5 875 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 COL22A1Q8NFW1 1626 aaPredicted RBP25.85■■□□□ 1.73
SPSB3-206ENST00000564709 TAF1P21675 1872 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 WTIPA6NIX2 430 aaPredicted RBP25.85■■□□□ 1.73
SPSB3-206ENST00000564709 NLRP12P59046 1061 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 PARP10Q53GL7 1025 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 KRT23Q9C075 422 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 BCL2L12Q9HB09 334 aa25.85■■□□□ 1.73
SPSB3-206ENST00000564709 SPATA31A1Q5TZJ5 1347 aa25.84■■□□□ 1.73
SPSB3-206ENST00000564709 LAMB2P55268 1798 aa25.84■■□□□ 1.73
SPSB3-206ENST00000564709 USP27XA6NNY8 438 aa25.84■■□□□ 1.73
SPSB3-206ENST00000564709 ADGRA1Q86SQ6 560 aa25.84■■□□□ 1.73
SPSB3-206ENST00000564709 NBPF11Q86T75 865 aa25.84■■□□□ 1.73
SPSB3-206ENST00000564709 TNNT1P13805 278 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 U2AF2P26368 475 aaKnown RBP eCLIP25.83■■□□□ 1.73
SPSB3-206ENST00000564709 GLIPR1L2Q4G1C9 344 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 NACAP1Q9BZK3 213 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 FMNL1O95466 1100 aaPredicted RBP25.83■■□□□ 1.73
SPSB3-206ENST00000564709 SDR42E1Q8WUS8 393 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 STAG1Q8WVM7 1258 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 ABCF2Q9UG63 623 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 KCNJ14Q9UNX9 436 aa25.83■■□□□ 1.73
SPSB3-206ENST00000564709 SMIM22K7EJ46 135 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 PPP6R2O75170 966 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 SMC2O95347 1197 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 SKILP12757 684 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 PNPLA7Q6ZV29 1317 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 WTAPQ15007 396 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 BPIFA3Q9BQP9 254 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 XPO4Q9C0E2 1151 aaKnown RBP25.82■■□□□ 1.72
SPSB3-206ENST00000564709 IFNKQ9P0W0 207 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 HPSEQ9Y251 543 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 RREB1Q92766 1687 aa25.82■■□□□ 1.72
SPSB3-206ENST00000564709 CYP7A1P22680 504 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 GYG1P46976 350 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 CCZ1BP86790 482 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 CCZ1P86791 482 aaPredicted RBP25.81■■□□□ 1.72
SPSB3-206ENST00000564709 PNOCQ13519 176 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 RTN1Q16799 776 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 JMYQ8N9B5 988 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 BCL9LQ86UU0 1499 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 STK36Q9NRP7 1315 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 BTBD18B2RXH4 712 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 GNAT2P19087 354 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 C3orf67Q6ZVT6 689 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 RGS22Q8NE09 1264 aa25.81■■□□□ 1.72
SPSB3-206ENST00000564709 MINDY4BA8MYZ0 360 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 IFNAR1P17181 557 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 RBM6P78332 1123 aaKnown RBP25.8■■□□□ 1.72
SPSB3-206ENST00000564709 SPECC1Q5M775 1068 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 NRAPQ86VF7 1730 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 NCAPHQ15003 741 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 RESP18Q5W5W9 173 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 MTERF4Q7Z6M4 381 aaKnown RBP25.8■■□□□ 1.72
SPSB3-206ENST00000564709 NUP133Q8WUM0 1156 aa25.8■■□□□ 1.72
SPSB3-206ENST00000564709 CICQ96RK0 1608 aaPredicted RBP25.79■■□□□ 1.72
SPSB3-206ENST00000564709 RTL9Q8NET4 1388 aa25.79■■□□□ 1.72
SPSB3-206ENST00000564709 SART3Q15020 963 aaKnown RBP25.79■■□□□ 1.72
SPSB3-206ENST00000564709 RAI14Q9P0K7 980 aa25.79■■□□□ 1.72
SPSB3-206ENST00000564709 AHDC1Q5TGY3 1603 aaPredicted RBP25.79■■□□□ 1.72
SPSB3-206ENST00000564709 KCNQ2O43526 872 aa25.79■■□□□ 1.72
SPSB3-206ENST00000564709 NEMFO60524 1076 aa25.79■■□□□ 1.72
SPSB3-206ENST00000564709 LMOD1P29536 600 aaPredicted RBP25.79■■□□□ 1.72
SPSB3-206ENST00000564709 PPARAQ07869 468 aa25.79■■□□□ 1.72
SPSB3-206ENST00000564709 NOSTRINQ8IVI9 506 aa25.79■■□□□ 1.72
SPSB3-206ENST00000564709 DIS3L2Q8IYB7 885 aaKnown RBP25.79■■□□□ 1.72
SPSB3-206ENST00000564709 COL1A1P02452 1464 aaPredicted RBP25.78■■□□□ 1.72
SPSB3-206ENST00000564709 ERICH2A1L162 156 aa25.78■■□□□ 1.72
SPSB3-206ENST00000564709 MMP1P03956 469 aa25.78■■□□□ 1.72
SPSB3-206ENST00000564709 ERFEQ4G0M1 354 aa25.78■■□□□ 1.72
SPSB3-206ENST00000564709 ZNF592Q92610 1267 aa25.78■■□□□ 1.72
SPSB3-206ENST00000564709 TIGD1Q96MW7 591 aa25.78■■□□□ 1.72
SPSB3-206ENST00000564709 CDCA7Q9BWT1 371 aaPredicted RBP25.78■■□□□ 1.72
SPSB3-206ENST00000564709 TMC6Q7Z403 805 aa25.77■■□□□ 1.72
SPSB3-206ENST00000564709 TRMT1Q9NXH9 659 aaKnown RBP25.77■■□□□ 1.72
SPSB3-206ENST00000564709 A0A1B0GUL6 1792 aa25.77■■□□□ 1.72
SPSB3-206ENST00000564709 CASZ1Q86V15 1759 aa25.77■■□□□ 1.72
SPSB3-206ENST00000564709 KCNQ4P56696 695 aa25.77■■□□□ 1.72
SPSB3-206ENST00000564709 TRIM22Q8IYM9 498 aa25.77■■□□□ 1.72
SPSB3-206ENST00000564709 BAZ2AQ9UIF9 1905 aaKnown RBP25.77■■□□□ 1.72
SPSB3-206ENST00000564709 TOB1P50616 345 aaPredicted RBP25.76■■□□□ 1.71
SPSB3-206ENST00000564709 LONRF3Q496Y0 759 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms