RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 APPBP2Q92624 585 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 SEC62Q99442 399 aaKnown RBP8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 CTNNA3Q9UI47 895 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 ISY1Q9ULR0 285 aaKnown RBP8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 ZDHHC9Q9Y397 364 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 TCHHQ07283 1943 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 MYO3BQ8WXR4 1341 aa8.79□□□□□ -1
MAP1LC3B-205ENST00000564638 GOLGA6L3A6NEY3 463 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 M0R2C6 588 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 LARGE1O95461 756 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 MCAMP43121 646 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 SCARF1Q14162 830 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 KLHL40Q2TBA0 621 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 CERS5Q8N5B7 392 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 TRPM4Q8TD43 1214 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 DPF2Q92785 391 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 NEK1Q96PY6 1258 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 ADARB2Q9NS39 739 aaKnown RBP8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 HDAC9Q9UKV0 1011 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 ATP6V1DQ9Y5K8 247 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 DDX49Q9Y6V7 483 aaKnown RBP8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 POLR2AP24928 1970 aaKnown RBP8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 FAM205AQ6ZU69 1335 aa8.78□□□□□ -1
MAP1LC3B-205ENST00000564638 COL1A1P02452 1464 aaPredicted RBP8.77□□□□□ -1
MAP1LC3B-205ENST00000564638 MBD3O95983 291 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CHGBP05060 677 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CYP21A2P08686 494 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 USP17L8P0C7I0 530 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 HSPD1P10809 573 aaKnown RBP8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 FGD1P98174 961 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 FOXD4L5Q5VV16 416 aaPredicted RBP8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PNMA8AQ86V59 439 aaPredicted RBP8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 OGFOD1Q8N543 542 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TBC1D22AQ8WUA7 517 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 FOXD4L4Q8WXT5 416 aaPredicted RBP8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GMLQ99445 158 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 DENND2AQ9ULE3 1009 aa8.77□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MAST2Q6P0Q8 1798 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ADAMTSL1Q8N6G6 1762 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MYH15Q9Y2K3 1946 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 STX6O43752 255 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 EGFRP00533 1210 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ZSCAN22P10073 491 aaPredicted RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PDCP20941 246 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GJB2P29033 226 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ADD2P35612 726 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 RBM5P52756 815 aaKnown RBP eCLIP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 FKBP1AP62942 108 aaKnown RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 C1QBPQ07021 282 aaKnown RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 RASGRF1Q13972 1273 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 UBE3CQ15386 1083 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ME3Q16798 604 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 IMMTQ16891 758 aaKnown RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PI16Q6UXB8 463 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 USP50Q70EL3 339 aaPredicted RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LDHDQ86WU2 507 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 WDR66Q8TBY9 1149 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 OSBP2Q969R2 916 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CHMP4CQ96CF2 233 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TCEANC2Q96MN5 208 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LARP6Q9BRS8 491 aaKnown RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MYOZ2Q9NPC6 264 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LMBRD1Q9NUN5 540 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TPCN1Q9ULQ1 816 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TTF2Q9UNY4 1162 aaKnown RBP8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 TAF6LQ9Y6J9 622 aa8.76□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SEMA3EO15041 775 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GPAA1O43292 621 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PRPF40AO75400 957 aaKnown RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 IDH1O75874 414 aaKnown RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 F13A1P00488 732 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 NCLP19338 710 aaKnown RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SYT1P21579 422 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 HIRAP54198 1017 aaPredicted RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ST3GAL1Q11201 340 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MAP3K12Q12852 859 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 GRIK5Q16478 980 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CFAP100Q494V2 611 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MAP1SQ66K74 1059 aaPredicted RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 CHADLQ6NUI6 762 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 Q6ZUG5 572 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 STOX1Q6ZVD7 989 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 SPATA5Q8NB90 893 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 MYH2Q9UKX2 1941 aa8.75□□□□□ -1.01
MAP1LC3B-205ENST00000564638 FSD2A1L4K1 749 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 E7EWF7 191 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 LDHBP07195 334 aaKnown RBP8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PDE6AP16499 860 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 PRDX5P30044 214 aa8.74□□□□□ -1.01
MAP1LC3B-205ENST00000564638 ZNF280AP59817 542 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms