RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 TTC39AQ5SRH9 613 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 MYH2Q9UKX2 1941 aa11.75□□□□□ -0.53
CLN6-203ENST00000563917 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
CLN6-203ENST00000563917 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
CLN6-203ENST00000563917 MECOMQ03112 1051 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 ZFPM1Q8IX07 1006 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 TMEM57Q8N5G2 664 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 CPA4Q9UI42 421 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 PTCH2Q9Y6C5 1203 aa11.74□□□□□ -0.53
CLN6-203ENST00000563917 GPR75-ASB3A0A0A6YYF3 556 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
CLN6-203ENST00000563917 BAG3O95817 575 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 PLCG2P16885 1265 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 PSMC4P43686 418 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 C17orf99Q6UX52 265 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 GADL1Q6ZQY3 521 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 RAET1EQ8TD07 263 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLN6-203ENST00000563917 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
CLN6-203ENST00000563917 PNMA6EA0A0J9YXQ4 647 aa11.72□□□□□ -0.53
CLN6-203ENST00000563917 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
CLN6-203ENST00000563917 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
CLN6-203ENST00000563917 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
CLN6-203ENST00000563917 SLC34A2O95436 690 aa11.72□□□□□ -0.53
CLN6-203ENST00000563917 ARID4AP29374 1257 aaPredicted RBP11.72□□□□□ -0.53
CLN6-203ENST00000563917 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
CLN6-203ENST00000563917 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
CLN6-203ENST00000563917 ZNF333Q96JL9 665 aa11.72□□□□□ -0.53
CLN6-203ENST00000563917 BIN2Q9UBW5 565 aaPredicted RBP11.72□□□□□ -0.53
CLN6-203ENST00000563917 DOCK2Q92608 1830 aa11.72□□□□□ -0.53
CLN6-203ENST00000563917 DDTLA6NHG4 134 aaPredicted RBP11.71□□□□□ -0.53
CLN6-203ENST00000563917 PHF20L1A8MW92 1017 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 IGSF3O75054 1194 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 MYCP01106 439 aaPredicted RBP11.71□□□□□ -0.53
CLN6-203ENST00000563917 PTPRAP18433 802 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 FCGRTP55899 365 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 ATP8B2P98198 1209 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 DIEXFQ68CQ4 756 aaKnown RBP11.71□□□□□ -0.53
CLN6-203ENST00000563917 NAA16Q6N069 864 aaPredicted RBP11.71□□□□□ -0.53
CLN6-203ENST00000563917 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 NSUN4Q96CB9 384 aaKnown RBP11.71□□□□□ -0.53
CLN6-203ENST00000563917 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 ARHGAP39Q9C0H5 1083 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.53
CLN6-203ENST00000563917 SRRDQ9UH36 339 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 TNNQ9UQP3 1299 aa11.71□□□□□ -0.53
CLN6-203ENST00000563917 A0A0G2JLL6 359 aaPredicted RBP11.7□□□□□ -0.54
CLN6-203ENST00000563917 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 TBC1D12O60347 775 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 MS4A1P11836 297 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 EN2P19622 333 aaPredicted RBP11.7□□□□□ -0.54
CLN6-203ENST00000563917 MCAMP43121 646 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 UBXN2AP68543 259 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 MAP3K10Q02779 954 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLN6-203ENST00000563917 TNNI3KQ59H18 835 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 PI16Q6UXB8 463 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 PRRT2Q7Z6L0 340 aaPredicted RBP11.7□□□□□ -0.54
CLN6-203ENST00000563917 SSH3Q8TE77 659 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 TRIM47Q96LD4 638 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 DHX36Q9H2U1 1008 aaKnown RBP11.7□□□□□ -0.54
CLN6-203ENST00000563917 AS3MTQ9HBK9 375 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
CLN6-203ENST00000563917 SLC45A1Q9Y2W3 748 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 AFG3L2Q9Y4W6 797 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
CLN6-203ENST00000563917 RFX7Q2KHR2 1363 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 ATRNL1Q5VV63 1379 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 MYPNQ86TC9 1320 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 CYP2C8P10632 490 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 RHBDL3P58872 404 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 POLA2Q14181 598 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 SH3BP5LQ7L8J4 393 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 ERC1Q8IUD2 1116 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
CLN6-203ENST00000563917 NKX2-3Q8TAU0 364 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 PI4KBQ9UBF8 816 aa11.69□□□□□ -0.54
CLN6-203ENST00000563917 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
CLN6-203ENST00000563917 HLA-DOAP06340 250 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 OSBPP22059 807 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 GRK4P32298 578 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 CAP1Q01518 475 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 HSP90AB4PQ58FF6 505 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 GPAT2Q6NUI2 795 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 CERS3Q8IU89 383 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 MIER1Q8N108 512 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 DBNDD2Q9BQY9 259 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms