RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CASP7P55210 303 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 GTF2IP78347 998 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 CLDN10P78369 228 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 PDE3AQ14432 1141 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 PARP10Q53GL7 1025 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 C6orf118Q5T5N4 469 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 SLC4A10Q6U841 1118 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 BICDL1Q6ZP65 573 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 TRIM50Q86XT4 487 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 NLGN1Q8N2Q7 840 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 CCDC191Q8NCU4 936 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 ZFP42Q96MM3 310 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 PURBQ96QR8 312 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 SRCIN1Q9C0H9 1055 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 NIP7Q9Y221 180 aaKnown RBP eCLIP6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 ABCC12Q96J65 1359 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 COL24A1Q17RW2 1714 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 A0A1W2PRU2 124 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 H7C1W4 665 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 SERPINB2P05120 415 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 PCCAP05165 728 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 CDK11BP21127 795 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 CCT4P50991 539 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 NEXNQ0ZGT2 675 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 SCARF1Q14162 830 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 GCKRQ14397 625 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 PRR5LQ6MZQ0 368 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 FTSJ3Q8IY81 847 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 SYNE4Q8N205 404 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 OGFOD1Q8N543 542 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 JARID2Q92833 1246 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 CWC25Q9NXE8 425 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 GMPR2Q9P2T1 348 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-207ENST00000563781 UTYO14607 1347 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 CACNA1FO60840 1977 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 FAM177BA6PVY3 158 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 GRM8O00222 908 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 DKK1O94907 266 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 STAU1O95793 577 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 RASA1P20936 1047 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 ATP1A2P50993 1020 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 SCNN1DP51172 638 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 MVPQ14764 893 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 ZBTB38Q8NAP3 1195 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 FAM89AQ96GI7 184 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 XAGE2Q96GT9 111 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 SUCLG2Q96I99 432 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 CRBNQ96SW2 442 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 MEIS3Q99687 375 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 UTP14AQ9BVJ6 771 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 USP44Q9H0E7 712 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 ARHGEF10LQ9HCE6 1279 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 DNAAF2Q9NVR5 837 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
HERPUD1-207ENST00000563781 SH3TC1Q8TE82 1336 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 CDHR2Q9BYE9 1310 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 RIC1Q4ADV7 1423 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 C10orf71Q711Q0 1435 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 ANKRD36CQ5JPF3 1778 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 N4BP2Q86UW6 1770 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 POTECB2RU33 542 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 IL2RAP01589 272 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 NBPF7P0C2Y1 421 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 CTSOP43234 321 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 CLN3Q13286 438 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 EPHA10Q5JZY3 1008 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 SLC10A5Q5PT55 438 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 UBE3BQ7Z3V4 1068 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 PPP1R42Q7Z4L9 355 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 ITPRIPQ8IWB1 547 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 CNBD1Q8NA66 436 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 KAZALD1Q96I82 304 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 INSM2Q96T92 566 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 ESYT1Q9BSJ8 1104 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 NYXQ9GZU5 481 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 ETNK1Q9HBU6 452 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 SENP2Q9HC62 589 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 RAB6BQ9NRW1 208 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 TRMT112Q9UI30 125 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 HRH3Q9Y5N1 445 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 PARP3Q9Y6F1 533 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 NRXN2Q9P2S2 1712 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 NUP98P52948 1817 aa6.52□□□□□ -1.37
HERPUD1-207ENST00000563781 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 FAM196BA6NMK8 535 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 TMEM229AB2RXF0 380 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 IRS4O14654 1257 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 INHAP05111 366 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 GDF10P55107 478 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 IRX6P78412 446 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 PTK7Q13308 1070 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 ELOAQ14241 798 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 CRTC2Q53ET0 693 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms