RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 ZC3H12AQ5D1E8 599 aaKnown RBP6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 RASIP1Q5U651 963 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 NFXL1Q6ZNB6 911 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 ACSBG1Q96GR2 724 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 CACNA2D2Q9NY47 1150 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 FAM8A1Q9UBU6 413 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 CCDC39Q9UFE4 941 aa6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 ZC3H7BQ9UGR2 993 aaKnown RBP6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 ANGEL1Q9UNK9 670 aaKnown RBP6.27□□□□□ -1.41
HMGB1P33-201ENST00000563485 FAM87AP0C7U9 286 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 IRAK1P51617 712 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 VSIG10LQ86VR7 867 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 ANKRD24Q8TF21 1146 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 ISL2Q96A47 359 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 RNF19AQ9NV58 838 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 CSADQ9Y600 493 aa6.26□□□□□ -1.41
HMGB1P33-201ENST00000563485 ERVK-24P63145 666 aa6.25□□□□□ -1.41
HMGB1P33-201ENST00000563485 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
HMGB1P33-201ENST00000563485 BSDC1Q9NW68 430 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P33-201ENST00000563485 PCOLCE2Q9UKZ9 415 aa6.25□□□□□ -1.41
HMGB1P33-201ENST00000563485 SAMM50Q9Y512 469 aa6.25□□□□□ -1.41
HMGB1P33-201ENST00000563485 COL17A1Q9UMD9 1497 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P33-201ENST00000563485 ANKRD33BA6NCL7 494 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 DCDC2CA8MYV0 355 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 LEFTY1O75610 366 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 TRIM37O94972 964 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 PDIA4P13667 645 aaKnown RBP6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 GNA15P30679 374 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 CYP27C1Q4G0S4 372 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 PPM1JQ5JR12 505 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 LLGL2Q6P1M3 1020 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 ABI1Q8IZP0 508 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 SSU72Q9NP77 194 aaKnown RBP6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 TTF2Q9UNY4 1162 aaKnown RBP6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 U3KQE9 123 aa6.24□□□□□ -1.41
HMGB1P33-201ENST00000563485 TAL1P17542 331 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 EIF4BP23588 611 aaKnown RBP6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 LRRC14Q15048 493 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 UBE3DQ7Z6J8 389 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 C12orf40Q86WS4 652 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 FAM181AQ8N9Y4 354 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 FRMD6Q96NE9 622 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 ADGRE2Q9UHX3 823 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 PCDHA4Q9UN74 947 aa6.23□□□□□ -1.41
HMGB1P33-201ENST00000563485 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 NTF4P34130 210 aa6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 FLCNQ8NFG4 579 aa6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 DUSP9Q99956 384 aaKnown RBP6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 DUSP23Q9BVJ7 150 aa6.22□□□□□ -1.41
HMGB1P33-201ENST00000563485 PTPN11Q06124 597 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 RING1Q06587 406 aa6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 COL19A1Q14993 1142 aa6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 ZNF574Q6ZN55 896 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 TP53INP2Q8IXH6 220 aa6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 PLD6Q8N2A8 252 aaKnown RBP6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 PAK6Q9NQU5 681 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 PICK1Q9NRD5 415 aa6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 CYP8B1Q9UNU6 501 aa6.21□□□□□ -1.42
HMGB1P33-201ENST00000563485 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 INPP5AQ14642 412 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 ZBTB37Q5TC79 503 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 LRFN4Q6PJG9 635 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 WFDC3Q8IUB2 231 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 NPAS4Q8IUM7 802 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 BCL7CQ8WUZ0 217 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 GAL3ST3Q96A11 431 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 AK5Q9Y6K8 562 aa6.2□□□□□ -1.42
HMGB1P33-201ENST00000563485 BNIP3Q12983 259 aa6.19□□□□□ -1.42
HMGB1P33-201ENST00000563485 SCARA3Q6AZY7 606 aa6.19□□□□□ -1.42
HMGB1P33-201ENST00000563485 DNAJC14Q6Y2X3 702 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P33-201ENST00000563485 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P33-201ENST00000563485 NETO1Q8TDF5 533 aa6.19□□□□□ -1.42
HMGB1P33-201ENST00000563485 ELMO3Q96BJ8 720 aa6.19□□□□□ -1.42
HMGB1P33-201ENST00000563485 PRAMEF27A3QJZ7 478 aa6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 FANCGO15287 622 aa6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 OXCT1P55809 520 aa6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 CCDC85BQ15834 202 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 SPRED2Q7Z698 418 aa6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 PLPPR2Q96GM1 343 aa6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 SLC5A6Q9Y289 635 aa6.18□□□□□ -1.42
HMGB1P33-201ENST00000563485 PAX4O43316 350 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 CDK8P49336 464 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 FGD1P98174 961 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 MAP3K11Q16584 847 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 MEI1Q5TIA1 1274 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 CBLL1Q75N03 491 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 AGBL5Q8NDL9 886 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms