RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CNKSR2Q8WXI2 1034 aa34.49■■■■□ 3.11
NME3-203ENST00000563367 WRNIP1Q96S55 665 aa34.49■■■■□ 3.11
NME3-203ENST00000563367 ZNF341Q9BYN7 854 aa34.49■■■■□ 3.11
NME3-203ENST00000563367 AATFQ9NY61 560 aaKnown RBP eCLIP34.49■■■■□ 3.11
NME3-203ENST00000563367 DDTLA6NHG4 134 aaPredicted RBP34.48■■■■□ 3.11
NME3-203ENST00000563367 IGSF3O75054 1194 aa34.48■■■■□ 3.11
NME3-203ENST00000563367 MAP4K4O95819 1239 aaPredicted RBP34.48■■■■□ 3.11
NME3-203ENST00000563367 ZKSCAN4Q969J2 545 aaPredicted RBP34.48■■■■□ 3.11
NME3-203ENST00000563367 SAGE1Q9NXZ1 904 aa34.48■■■■□ 3.11
NME3-203ENST00000563367 ATRNL1Q5VV63 1379 aa34.48■■■■□ 3.11
NME3-203ENST00000563367 ZSCAN29Q8IWY8 852 aaPredicted RBP34.47■■■■□ 3.11
NME3-203ENST00000563367 OPTNQ96CV9 577 aa34.47■■■■□ 3.11
NME3-203ENST00000563367 CSADQ9Y600 493 aa34.47■■■■□ 3.11
NME3-203ENST00000563367 NPM3O75607 178 aaKnown RBP34.46■■■■□ 3.11
NME3-203ENST00000563367 CYP7A1P22680 504 aa34.46■■■■□ 3.11
NME3-203ENST00000563367 PPP4CP60510 307 aa34.46■■■■□ 3.11
NME3-203ENST00000563367 TEX11Q8IYF3 940 aa34.46■■■■□ 3.11
NME3-203ENST00000563367 NOL10Q9BSC4 688 aaKnown RBP34.46■■■■□ 3.11
NME3-203ENST00000563367 SNCAIPQ9Y6H5 919 aa34.46■■■■□ 3.11
NME3-203ENST00000563367 BAG3O95817 575 aa34.45■■■■□ 3.11
NME3-203ENST00000563367 SREBF2Q12772 1141 aa34.45■■■■□ 3.11
NME3-203ENST00000563367 MAGEB6Q8N7X4 407 aa34.45■■■■□ 3.11
NME3-203ENST00000563367 DNAJC2Q99543 621 aaKnown RBP34.45■■■■□ 3.11
NME3-203ENST00000563367 ZNF112Q9UJU3 913 aa34.45■■■■□ 3.11
NME3-203ENST00000563367 MANSC4A6NHS7 340 aaPredicted RBP34.44■■■■□ 3.1
NME3-203ENST00000563367 SLURP2P0DP57 97 aa34.44■■■■□ 3.1
NME3-203ENST00000563367 ATP5JP18859 108 aa34.44■■■■□ 3.1
NME3-203ENST00000563367 INPP5BP32019 993 aa34.44■■■■□ 3.1
NME3-203ENST00000563367 EDC3Q96F86 508 aaKnown RBP34.44■■■■□ 3.1
NME3-203ENST00000563367 BOLA2Q9H3K6 86 aa34.44■■■■□ 3.1
NME3-203ENST00000563367 GOLIM4O00461 696 aa34.43■■■■□ 3.1
NME3-203ENST00000563367 MAP3K12Q12852 859 aa34.43■■■■□ 3.1
NME3-203ENST00000563367 DYNLL1P63167 89 aaKnown RBP34.42■■■■□ 3.1
NME3-203ENST00000563367 TTF1Q15361 905 aaPredicted RBP34.42■■■■□ 3.1
NME3-203ENST00000563367 PLCG2P16885 1265 aa34.41■■■■□ 3.1
NME3-203ENST00000563367 OSBPL5Q9H0X9 879 aaPredicted RBP34.41■■■■□ 3.1
NME3-203ENST00000563367 SUPT16HQ9Y5B9 1047 aaKnown RBP34.41■■■■□ 3.1
NME3-203ENST00000563367 MYH7P12883 1935 aa34.4■■■■□ 3.1
NME3-203ENST00000563367 SPDYE5A6NIY4 337 aa34.4■■■■□ 3.1
NME3-203ENST00000563367 MAP3K10Q02779 954 aa34.4■■■■□ 3.1
NME3-203ENST00000563367 MIGA1Q8NAN2 632 aa34.4■■■■□ 3.1
NME3-203ENST00000563367 OTUD5Q96G74 571 aa34.4■■■■□ 3.1
NME3-203ENST00000563367 PHF20L1A8MW92 1017 aa34.39■■■■□ 3.1
NME3-203ENST00000563367 TNS4Q8IZW8 715 aa34.39■■■■□ 3.1
NME3-203ENST00000563367 TGFBRAP1Q8WUH2 860 aa34.39■■■■□ 3.1
NME3-203ENST00000563367 HAUS7Q99871 368 aa34.39■■■■□ 3.1
NME3-203ENST00000563367 SIPA1L1O43166 1804 aa34.39■■■■□ 3.1
NME3-203ENST00000563367 COL2A1P02458 1487 aaPredicted RBP34.39■■■■□ 3.1
NME3-203ENST00000563367 INHBEP58166 350 aa34.38■■■■□ 3.09
NME3-203ENST00000563367 IFNL1Q8IU54 200 aa34.38■■■■□ 3.09
NME3-203ENST00000563367 MS4A4AQ96JQ5 239 aa34.38■■■■□ 3.09
NME3-203ENST00000563367 PAG1Q9NWQ8 432 aa34.38■■■■□ 3.09
NME3-203ENST00000563367 MYH1P12882 1939 aa34.38■■■■□ 3.09
NME3-203ENST00000563367 IGF2BP3O00425 579 aaKnown RBP eCLIP34.37■■■■□ 3.09
NME3-203ENST00000563367 TBC1D8O95759 1140 aa34.37■■■■□ 3.09
NME3-203ENST00000563367 ERO1BQ86YB8 467 aa34.37■■■■□ 3.09
NME3-203ENST00000563367 PDE6AP16499 860 aa34.36■■■■□ 3.09
NME3-203ENST00000563367 SLC9C2Q5TAH2 1124 aa34.36■■■■□ 3.09
NME3-203ENST00000563367 TMED8Q6PL24 325 aaPredicted RBP34.36■■■■□ 3.09
NME3-203ENST00000563367 MAPKAPK5Q8IW41 473 aa34.36■■■■□ 3.09
NME3-203ENST00000563367 ECHDC1Q9NTX5 307 aa34.36■■■■□ 3.09
NME3-203ENST00000563367 TESPA1A2RU30 521 aaPredicted RBP34.35■■■■□ 3.09
NME3-203ENST00000563367 NOL9Q5SY16 702 aaKnown RBP34.35■■■■□ 3.09
NME3-203ENST00000563367 EXOC6Q8TAG9 804 aa34.35■■■■□ 3.09
NME3-203ENST00000563367 PTPN18Q99952 460 aa34.35■■■■□ 3.09
NME3-203ENST00000563367 FLT1P17948 1338 aa34.34■■■■□ 3.09
NME3-203ENST00000563367 HDAC1Q13547 482 aaPredicted RBP34.34■■■■□ 3.09
NME3-203ENST00000563367 DOCK1Q14185 1865 aa34.34■■■■□ 3.09
NME3-203ENST00000563367 TCRBV5S4A2TA0A5A2 114 aa34.33■■■■□ 3.09
NME3-203ENST00000563367 FAM196BA6NMK8 535 aa34.33■■■■□ 3.09
NME3-203ENST00000563367 IRF6O14896 467 aa34.33■■■■□ 3.09
NME3-203ENST00000563367 AAMPQ13685 434 aa34.33■■■■□ 3.09
NME3-203ENST00000563367 TSHZ3Q63HK5 1081 aa34.33■■■■□ 3.09
NME3-203ENST00000563367 R3HDMLQ9H3Y0 253 aa34.33■■■■□ 3.09
NME3-203ENST00000563367 ZNF532Q9HCE3 1301 aa34.32■■■■□ 3.09
NME3-203ENST00000563367 TBC1D12O60347 775 aa34.32■■■■□ 3.08
NME3-203ENST00000563367 PPIL2Q13356 520 aa34.32■■■■□ 3.08
NME3-203ENST00000563367 BRI3BPQ8WY22 251 aa34.32■■■■□ 3.08
NME3-203ENST00000563367 GTF2A2P52657 109 aa34.31■■■■□ 3.08
NME3-203ENST00000563367 PPATQ06203 517 aa34.31■■■■□ 3.08
NME3-203ENST00000563367 SLFNL1Q499Z3 407 aa34.31■■■■□ 3.08
NME3-203ENST00000563367 RIOK1Q9BRS2 568 aaKnown RBP34.31■■■■□ 3.08
NME3-203ENST00000563367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.31■■■■□ 3.08
NME3-203ENST00000563367 ATAD5Q96QE3 1844 aa34.31■■■■□ 3.08
NME3-203ENST00000563367 PHIPQ8WWQ0 1821 aa34.3■■■■□ 3.08
NME3-203ENST00000563367 CCL15-CCL14A0A0B4J2E2 113 aa34.3■■■■□ 3.08
NME3-203ENST00000563367 CCL15Q16663 113 aa34.3■■■■□ 3.08
NME3-203ENST00000563367 OTUD7AQ8TE49 926 aaPredicted RBP34.3■■■■□ 3.08
NME3-203ENST00000563367 CFHR5Q9BXR6 569 aa34.3■■■■□ 3.08
NME3-203ENST00000563367 ALDH1A1P00352 501 aa34.29■■■■□ 3.08
NME3-203ENST00000563367 CERS3Q8IU89 383 aa34.29■■■■□ 3.08
NME3-203ENST00000563367 SCYL3Q8IZE3 742 aa34.29■■■■□ 3.08
NME3-203ENST00000563367 GPATCH3Q96I76 525 aa34.29■■■■□ 3.08
NME3-203ENST00000563367 DHX36Q9H2U1 1008 aaKnown RBP34.29■■■■□ 3.08
NME3-203ENST00000563367 SAP30BPQ9UHR5 308 aaKnown RBP34.29■■■■□ 3.08
NME3-203ENST00000563367 PALD1Q9ULE6 856 aa34.29■■■■□ 3.08
NME3-203ENST00000563367 MAGEB6P1A0A0J9YX57 407 aa34.28■■■■□ 3.08
NME3-203ENST00000563367 CHGBP05060 677 aa34.28■■■■□ 3.08
NME3-203ENST00000563367 ADD2P35612 726 aa34.28■■■■□ 3.08
NME3-203ENST00000563367 PI4KBQ9UBF8 816 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms