RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
LINC00557-201ENST00000563184 GFRA2O00451 464 aa8.98□□□□□ -0.97
LINC00557-201ENST00000563184 RPL6Q02878 288 aaKnown RBP8.98□□□□□ -0.97
LINC00557-201ENST00000563184 APOBRQ0VD83 1088 aa8.98□□□□□ -0.97
LINC00557-201ENST00000563184 ZC3H12AQ5D1E8 599 aaKnown RBP8.98□□□□□ -0.97
LINC00557-201ENST00000563184 PLPPR2Q96GM1 343 aa8.98□□□□□ -0.97
LINC00557-201ENST00000563184 C1QTNF9BB2RNN3 333 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 TMPRSS2O15393 492 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 ATF4P18848 351 aaPredicted RBP8.97□□□□□ -0.97
LINC00557-201ENST00000563184 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
LINC00557-201ENST00000563184 Q6ZS46 218 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 REC114Q7Z4M0 266 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 CD163Q86VB7 1156 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 SMG8Q8ND04 991 aaKnown RBP8.97□□□□□ -0.97
LINC00557-201ENST00000563184 GMLQ99445 158 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
LINC00557-201ENST00000563184 POLR3KQ9Y2Y1 108 aaPredicted RBP8.97□□□□□ -0.97
LINC00557-201ENST00000563184 TIAF1O95411 115 aa8.96□□□□□ -0.98
LINC00557-201ENST00000563184 GNL2Q13823 731 aaKnown RBP8.96□□□□□ -0.98
LINC00557-201ENST00000563184 SEZ6Q53EL9 994 aa8.96□□□□□ -0.98
LINC00557-201ENST00000563184 AKAP4Q5JQC9 854 aa8.96□□□□□ -0.98
LINC00557-201ENST00000563184 NKD1Q969G9 470 aa8.96□□□□□ -0.98
LINC00557-201ENST00000563184 RAD18Q9NS91 495 aa8.96□□□□□ -0.98
LINC00557-201ENST00000563184 CSADQ9Y600 493 aa8.96□□□□□ -0.98
LINC00557-201ENST00000563184 DCDC2CA8MYV0 355 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 C9orf172C9J069 976 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 ADH5P11766 374 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 NOS3P29474 1203 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 CHRNA4P43681 627 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 RING1Q06587 406 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 ADGRE1Q14246 886 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 MBTPS1Q14703 1052 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 NUTM2GQ5VZR2 741 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 CYFIP1Q7L576 1253 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 AKTIPQ9H8T0 292 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 BRMS1Q9HCU9 246 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 CRIM1Q9NZV1 1036 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 USP21Q9UK80 565 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 EFR3BQ9Y2G0 817 aa8.95□□□□□ -0.98
LINC00557-201ENST00000563184 BPNT1O95861 308 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 APBA3O96018 575 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 FGRP09769 529 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 SLFN14P0C7P3 912 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 DRD2P14416 443 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 DNAJA1P31689 397 aaKnown RBP8.94□□□□□ -0.98
LINC00557-201ENST00000563184 SOX9P48436 509 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 ID3Q02535 119 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 ARID5AQ03989 594 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 SOX4Q06945 474 aaPredicted RBP8.94□□□□□ -0.98
LINC00557-201ENST00000563184 CWF19L2Q2TBE0 894 aaKnown RBP8.94□□□□□ -0.98
LINC00557-201ENST00000563184 C12orf40Q86WS4 652 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 WFDC12Q8WWY7 111 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 SREK1Q8WXA9 508 aaKnown RBP8.94□□□□□ -0.98
LINC00557-201ENST00000563184 SPATA32Q96LK8 384 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 NACC1Q96RE7 527 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 GSX1Q9H4S2 264 aaPredicted RBP8.94□□□□□ -0.98
LINC00557-201ENST00000563184 CYP4F12Q9HCS2 524 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 SNCAIPQ9Y6H5 919 aa8.94□□□□□ -0.98
LINC00557-201ENST00000563184 IREB2P48200 963 aaKnown RBP8.93□□□□□ -0.98
LINC00557-201ENST00000563184 NASPP49321 788 aaPredicted RBP8.93□□□□□ -0.98
LINC00557-201ENST00000563184 ERVK-24P63145 666 aa8.93□□□□□ -0.98
LINC00557-201ENST00000563184 HNRNPUQ00839 825 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC00557-201ENST00000563184 NRG1Q02297 640 aaPredicted RBP8.93□□□□□ -0.98
LINC00557-201ENST00000563184 HDXQ7Z353 690 aa8.93□□□□□ -0.98
LINC00557-201ENST00000563184 MCF2L2Q86YR7 1114 aa8.93□□□□□ -0.98
LINC00557-201ENST00000563184 C2CD4AQ8NCU7 369 aaPredicted RBP8.93□□□□□ -0.98
LINC00557-201ENST00000563184 SEC16BQ96JE7 1060 aa8.93□□□□□ -0.98
LINC00557-201ENST00000563184 DISC1Q9NRI5 854 aa8.93□□□□□ -0.98
LINC00557-201ENST00000563184 HIF3AQ9Y2N7 669 aa8.93□□□□□ -0.98
LINC00557-201ENST00000563184 GRIN3BO60391 1043 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 ADAM23O75077 832 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 NTF4P34130 210 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 PREPP48147 710 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 PPM1JQ5JR12 505 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 ELMO3Q96BJ8 720 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 FANCD2OSQ96PS1 177 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 UBL7Q96S82 380 aaPredicted RBP8.92□□□□□ -0.98
LINC00557-201ENST00000563184 PRKAG2Q9UGJ0 569 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 AP4E1Q9UPM8 1137 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 CORINQ9Y5Q5 1042 aa8.92□□□□□ -0.98
LINC00557-201ENST00000563184 CLCQ05315 142 aa8.91□□□□□ -0.98
LINC00557-201ENST00000563184 COL9A2Q14055 689 aaPredicted RBP8.91□□□□□ -0.98
LINC00557-201ENST00000563184 ANKRD34AQ69YU3 496 aa8.91□□□□□ -0.98
LINC00557-201ENST00000563184 FDX2Q6P4F2 183 aa8.91□□□□□ -0.98
LINC00557-201ENST00000563184 C12orf50Q8NA57 414 aaPredicted RBP8.91□□□□□ -0.98
LINC00557-201ENST00000563184 TANGO6Q9C0B7 1094 aa8.91□□□□□ -0.98
LINC00557-201ENST00000563184 TACC3Q9Y6A5 838 aa8.91□□□□□ -0.98
LINC00557-201ENST00000563184 PRR36Q9H6K5 1346 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 PRAMEF27A3QJZ7 478 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 ATE1O95260 518 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 GLB1P16278 677 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 VPS37DQ86XT2 251 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 REXO1Q8N1G1 1221 aaKnown RBP8.9□□□□□ -0.98
LINC00557-201ENST00000563184 MEGF10Q96KG7 1140 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 EHMT1Q9H9B1 1298 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 PPT2Q9UMR5 302 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 ACTL7BQ9Y614 415 aa8.9□□□□□ -0.98
LINC00557-201ENST00000563184 IGSF3O75054 1194 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 NEFMP07197 916 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 MCM4P33991 863 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1733.9 ms