RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 LARP6Q9BRS8 491 aaKnown RBP16.6■□□□□ 0.25
SPG7-206ENST00000562775 KRT23Q9C075 422 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 NEDD4P46934 1319 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 PRC1O43663 620 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 PCP11498 1178 aaKnown RBP16.6■□□□□ 0.25
SPG7-206ENST00000562775 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
SPG7-206ENST00000562775 JDP2Q8WYK2 163 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 ZDHHC15Q96MV8 337 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
SPG7-206ENST00000562775 MCM9Q9NXL9 1143 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
SPG7-206ENST00000562775 B4E1Z4 1266 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 RAD17O75943 681 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 FGRP09769 529 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 DDIT3P35638 169 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 ANTXR2P58335 489 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 ME3Q16798 604 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 BRF1Q92994 677 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
SPG7-206ENST00000562775 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
SPG7-206ENST00000562775 CDK5RAP2Q96SN8 1893 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 PSMD14O00487 310 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 LARGE1O95461 756 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
SPG7-206ENST00000562775 USP17L8P0C7I0 530 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
SPG7-206ENST00000562775 MAPKAPK5Q8IW41 473 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 INCENPQ9NQS7 918 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.24
SPG7-206ENST00000562775 LAMB1P07942 1786 aa16.58■□□□□ 0.24
SPG7-206ENST00000562775 NAV1Q8NEY1 1877 aa16.57■□□□□ 0.24
SPG7-206ENST00000562775 CYB5R4Q7L1T6 521 aa16.57■□□□□ 0.24
SPG7-206ENST00000562775 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
SPG7-206ENST00000562775 GMLQ99445 158 aa16.57■□□□□ 0.24
SPG7-206ENST00000562775 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
SPG7-206ENST00000562775 USP40Q9NVE5 1235 aa16.57■□□□□ 0.24
SPG7-206ENST00000562775 SMIM22K7EJ46 135 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 KDM4AO75164 1064 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 CYP2D6P10635 497 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 EVCP57679 992 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 CXCL9Q07325 125 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 CIAPIN1Q6FI81 312 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 AGBL3Q8NEM8 1001 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 MTA3Q9BTC8 594 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 ZSWIM5Q9P217 1185 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 FLT1P17948 1338 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
SPG7-206ENST00000562775 ORC4O43929 436 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 WDHD1O75717 1129 aaPredicted RBP16.55■□□□□ 0.24
SPG7-206ENST00000562775 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
SPG7-206ENST00000562775 RBM5P52756 815 aaKnown RBP eCLIP16.55■□□□□ 0.241e-7■■■□□ 18.3
SPG7-206ENST00000562775 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
SPG7-206ENST00000562775 STK11IPQ8N1F8 1099 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 NKX2-3Q8TAU0 364 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 ESR2Q92731 530 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 HDAC9Q9UKV0 1011 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
SPG7-206ENST00000562775 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
SPG7-206ENST00000562775 ROBO3Q96MS0 1386 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 NT5C2P49902 561 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 RASSF7Q02833 373 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 PDE4BQ07343 736 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 APOBRQ0VD83 1088 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
SPG7-206ENST00000562775 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
SPG7-206ENST00000562775 ANGEL1Q9UNK9 670 aaKnown RBP16.55■□□□□ 0.24
SPG7-206ENST00000562775 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
SPG7-206ENST00000562775 SH2B2O14492 632 aaPredicted RBP16.54■□□□□ 0.24
SPG7-206ENST00000562775 TNIP1Q15025 636 aa16.54■□□□□ 0.24
SPG7-206ENST00000562775 OGFOD1Q8N543 542 aa16.54■□□□□ 0.24
SPG7-206ENST00000562775 NECAB1Q8N987 351 aa16.54■□□□□ 0.24
SPG7-206ENST00000562775 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
SPG7-206ENST00000562775 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
SPG7-206ENST00000562775 SAP30BPQ9UHR5 308 aaKnown RBP16.54■□□□□ 0.24
SPG7-206ENST00000562775 PFKFB2O60825 505 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 PRELPP51888 382 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 EVX2Q03828 476 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
SPG7-206ENST00000562775 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
SPG7-206ENST00000562775 MYH1P12882 1939 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 ECM29Q5VYK3 1845 aa16.53■□□□□ 0.24
SPG7-206ENST00000562775 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.24
SPG7-206ENST00000562775 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
SPG7-206ENST00000562775 LIFRP42702 1097 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 PLCD1P51178 756 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 STK3Q13188 491 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms