RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 BCRP11274 1271 aa20.56■□□□□ 0.88
CMTM3-205ENST00000562707 TIMM10P62072 90 aa20.56■□□□□ 0.88
CMTM3-205ENST00000562707 UBXN2AP68543 259 aa20.56■□□□□ 0.88
CMTM3-205ENST00000562707 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
CMTM3-205ENST00000562707 AKAP2Q9Y2D5 859 aa20.56■□□□□ 0.88
CMTM3-205ENST00000562707 A0A0G2JLL6 359 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-205ENST00000562707 PTPRAP18433 802 aa20.55■□□□□ 0.88
CMTM3-205ENST00000562707 FXR1P51114 621 aaKnown RBP eCLIP20.55■□□□□ 0.88
CMTM3-205ENST00000562707 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
CMTM3-205ENST00000562707 PRRT2Q7Z6L0 340 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-205ENST00000562707 DPF3Q92784 378 aa20.55■□□□□ 0.88
CMTM3-205ENST00000562707 FAM163AQ96GL9 167 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-205ENST00000562707 GJB1P08034 283 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 CCL5P13501 91 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 GJA8P48165 433 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 MAP3K10Q02779 954 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 PRKCZQ05513 592 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 RASGRF1Q13972 1273 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 MEIS3Q99687 375 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 RNF208Q9H0X6 261 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
CMTM3-205ENST00000562707 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
CMTM3-205ENST00000562707 CTNND1O60716 968 aaKnown RBP20.53■□□□□ 0.88
CMTM3-205ENST00000562707 BTDP43251 543 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 PICALMQ13492 652 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 MVPQ14764 893 aaKnown RBP20.53■□□□□ 0.88
CMTM3-205ENST00000562707 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 SH3BP5LQ7L8J4 393 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 SLAIN1Q8ND83 568 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 SLC45A1Q9Y2W3 748 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
CMTM3-205ENST00000562707 A0A1B0GUL7 405 aa20.52■□□□□ 0.88
CMTM3-205ENST00000562707 DDTLA6NHG4 134 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-205ENST00000562707 GNAI3P08754 354 aa20.52■□□□□ 0.88
CMTM3-205ENST00000562707 XAGE2Q96GT9 111 aa20.52■□□□□ 0.88
CMTM3-205ENST00000562707 HTATIP2Q9BUP3 242 aa20.52■□□□□ 0.88
CMTM3-205ENST00000562707 BRCA2P51587 3418 aa20.52■□□□□ 0.88
CMTM3-205ENST00000562707 SRGAP3O43295 1099 aa20.51■□□□□ 0.87
CMTM3-205ENST00000562707 TFCP2Q12800 502 aa20.51■□□□□ 0.87
CMTM3-205ENST00000562707 SMCR8Q8TEV9 937 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-205ENST00000562707 NEUROD6Q96NK8 337 aa20.51■□□□□ 0.87
CMTM3-205ENST00000562707 DDX4Q9NQI0 724 aaKnown RBP20.51■□□□□ 0.87
CMTM3-205ENST00000562707 GABRQQ9UN88 632 aa20.51■□□□□ 0.87
CMTM3-205ENST00000562707 MROH7-TTC4A0A0A0MT08 1334 aa20.51■□□□□ 0.87
CMTM3-205ENST00000562707 GPR75-ASB3A0A0A6YYF3 556 aa20.5■□□□□ 0.87
CMTM3-205ENST00000562707 TRIM75PA6NK02 468 aa20.5■□□□□ 0.87
CMTM3-205ENST00000562707 ADCY3O60266 1144 aa20.5■□□□□ 0.87
CMTM3-205ENST00000562707 LDHCP07864 332 aa20.5■□□□□ 0.87
CMTM3-205ENST00000562707 MECOMQ03112 1051 aa20.5■□□□□ 0.87
CMTM3-205ENST00000562707 GORABQ5T7V8 394 aa20.5■□□□□ 0.87
CMTM3-205ENST00000562707 TNPO2O14787 897 aaKnown RBP20.49■□□□□ 0.87
CMTM3-205ENST00000562707 TBC1D12O60347 775 aa20.49■□□□□ 0.87
CMTM3-205ENST00000562707 FLT3LGP49771 235 aa20.49■□□□□ 0.87
CMTM3-205ENST00000562707 GSTO1P78417 241 aa20.49■□□□□ 0.87
CMTM3-205ENST00000562707 ARHGAP45Q92619 1136 aa20.49■□□□□ 0.87
CMTM3-205ENST00000562707 ZSWIM8A7E2V4 1837 aa20.48■□□□□ 0.87
CMTM3-205ENST00000562707 RFX7Q2KHR2 1363 aa20.48■□□□□ 0.87
CMTM3-205ENST00000562707 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
CMTM3-205ENST00000562707 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-205ENST00000562707 SLURP2P0DP57 97 aa20.48■□□□□ 0.87
CMTM3-205ENST00000562707 RARSP54136 660 aaKnown RBP20.48■□□□□ 0.87
CMTM3-205ENST00000562707 CHRDL2Q6WN34 429 aa20.48■□□□□ 0.87
CMTM3-205ENST00000562707 U2AF1L4Q8WU68 220 aaKnown RBP20.48■□□□□ 0.87
CMTM3-205ENST00000562707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.48■□□□□ 0.87
CMTM3-205ENST00000562707 AGTPBP1Q9UPW5 1226 aa20.48■□□□□ 0.87
CMTM3-205ENST00000562707 NR2E3Q9Y5X4 410 aa20.48■□□□□ 0.87
CMTM3-205ENST00000562707 CAPN2P17655 700 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 RHBDL3P58872 404 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 MTX1Q13505 466 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 PXYLP1Q8TE99 480 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 COA7Q96BR5 231 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 UNC93B1Q9H1C4 597 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 HMG20BQ9P0W2 317 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
CMTM3-205ENST00000562707 SGPL1O95470 568 aa20.46■□□□□ 0.87
CMTM3-205ENST00000562707 IRF5Q13568 498 aa20.46■□□□□ 0.87
CMTM3-205ENST00000562707 UBE2Q1Q7Z7E8 422 aa20.46■□□□□ 0.87
CMTM3-205ENST00000562707 SPATA5Q8NB90 893 aa20.46■□□□□ 0.87
CMTM3-205ENST00000562707 OSBPL5Q9H0X9 879 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-205ENST00000562707 RAI14Q9P0K7 980 aa20.46■□□□□ 0.87
CMTM3-205ENST00000562707 IPO8O15397 1037 aaKnown RBP20.45■□□□□ 0.86
CMTM3-205ENST00000562707 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-205ENST00000562707 ELNP15502 786 aa20.45■□□□□ 0.86
CMTM3-205ENST00000562707 CCDC84Q86UT8 332 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-205ENST00000562707 ANKRD13CQ8N6S4 541 aa20.45■□□□□ 0.86
CMTM3-205ENST00000562707 NSUN4Q96CB9 384 aaKnown RBP20.45■□□□□ 0.86
CMTM3-205ENST00000562707 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
CMTM3-205ENST00000562707 TFRCP02786 760 aaKnown RBP20.44■□□□□ 0.86
CMTM3-205ENST00000562707 INHAP05111 366 aa20.44■□□□□ 0.86
CMTM3-205ENST00000562707 SPP2Q13103 211 aa20.44■□□□□ 0.86
CMTM3-205ENST00000562707 G3BP1Q13283 466 aaKnown RBP eCLIP20.44■□□□□ 0.86
CMTM3-205ENST00000562707 PABPC4Q13310 644 aaKnown RBP eCLIP20.44■□□□□ 0.86
CMTM3-205ENST00000562707 TBC1D9Q6ZT07 1266 aa20.44■□□□□ 0.86
CMTM3-205ENST00000562707 PROCA1Q8NCQ7 364 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-205ENST00000562707 ZNF384Q8TF68 577 aa20.44■□□□□ 0.86
CMTM3-205ENST00000562707 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
CMTM3-205ENST00000562707 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-205ENST00000562707 AK9Q5TCS8 1911 aa20.44■□□□□ 0.86
CMTM3-205ENST00000562707 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms