RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 ZFPM1Q8IX07 1006 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 ZGPATQ8N5A5 531 aaKnown RBP10.45□□□□□ -0.74
PALB2-202ENST00000561514 ARHGAP45Q92619 1136 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 SHISA4Q96DD7 197 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 SLC45A1Q9Y2W3 748 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 COL2A1P02458 1487 aaPredicted RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 ADORA1P30542 326 aa10.44□□□□□ -0.74
PALB2-202ENST00000561514 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 SCYL3Q8IZE3 742 aa10.44□□□□□ -0.74
PALB2-202ENST00000561514 PARK7Q99497 189 aaKnown RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 MEIS3Q99687 375 aa10.44□□□□□ -0.74
PALB2-202ENST00000561514 SIL1Q9H173 461 aa10.44□□□□□ -0.74
PALB2-202ENST00000561514 USP40Q9NVE5 1235 aa10.44□□□□□ -0.74
PALB2-202ENST00000561514 NOB1Q9ULX3 412 aaKnown RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 PA2G4Q9UQ80 394 aaKnown RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 LRRFIP2Q9Y608 721 aaKnown RBP10.44□□□□□ -0.74
PALB2-202ENST00000561514 PTPRAP18433 802 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 OSBPP22059 807 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 RGS3P49796 1198 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 RARSP54136 660 aaKnown RBP10.43□□□□□ -0.74
PALB2-202ENST00000561514 RHBDL3P58872 404 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 TCP10Q12799 353 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 SH3TC2Q8TF17 1288 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 ZNF384Q8TF68 577 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 CPA4Q9UI42 421 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 AFG3L2Q9Y4W6 797 aa10.43□□□□□ -0.74
PALB2-202ENST00000561514 MROH7-TTC4A0A0A0MT08 1334 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 GPR75-ASB3A0A0A6YYF3 556 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 TBC1D12O60347 775 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 CTNND1O60716 968 aaKnown RBP10.42□□□□□ -0.74
PALB2-202ENST00000561514 MAP4K4O95819 1239 aaPredicted RBP10.42□□□□□ -0.74
PALB2-202ENST00000561514 HOXD10P28358 340 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 DSG3P32926 999 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 PSMC4P43686 418 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
PALB2-202ENST00000561514 POLA2Q14181 598 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 SLC4A8Q2Y0W8 1093 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 FASTKD5Q7L8L6 764 aaKnown RBP10.42□□□□□ -0.74
PALB2-202ENST00000561514 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
PALB2-202ENST00000561514 DDX4Q9NQI0 724 aaKnown RBP10.42□□□□□ -0.74
PALB2-202ENST00000561514 MYPNQ86TC9 1320 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 A0A1B0GUL7 405 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 DDTLA6NHG4 134 aaPredicted RBP10.41□□□□□ -0.74
PALB2-202ENST00000561514 GJB1P08034 283 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 GNAI3P08754 354 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 CAPN2P17655 700 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 GRK4P32298 578 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 GJA8P48165 433 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 MVPQ14764 893 aaKnown RBP10.41□□□□□ -0.74
PALB2-202ENST00000561514 MTFR1Q15390 333 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 DIEXFQ68CQ4 756 aaKnown RBP10.41□□□□□ -0.74
PALB2-202ENST00000561514 SPTY2D1Q68D10 685 aaPredicted RBP10.41□□□□□ -0.74
PALB2-202ENST00000561514 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 XAGE2Q96GT9 111 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 AKAP2Q9Y2D5 859 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 ZHX2Q9Y6X8 837 aa10.41□□□□□ -0.74
PALB2-202ENST00000561514 ZSWIM8A7E2V4 1837 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 CYP2C8P10632 490 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 ARID4AP29374 1257 aaPredicted RBP10.4□□□□□ -0.74
PALB2-202ENST00000561514 BTDP43251 543 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 FCGRTP55899 365 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 TIMM10P62072 90 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 MECOMQ03112 1051 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 PRKCZQ05513 592 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 IRF5Q13568 498 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 DZIP1Q86YF9 867 aaKnown RBP10.4□□□□□ -0.74
PALB2-202ENST00000561514 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 PRO3102Q9H379 93 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 PICK1Q9NRD5 415 aa10.4□□□□□ -0.74
PALB2-202ENST00000561514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.4□□□□□ -0.74
PALB2-202ENST00000561514 H0YGN5 161 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 IGSF3O75054 1194 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 FMNL1O95466 1100 aaPredicted RBP10.39□□□□□ -0.75
PALB2-202ENST00000561514 CCL5P13501 91 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 TFCP2Q12800 502 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 PROCA1Q8NCQ7 364 aaPredicted RBP10.39□□□□□ -0.75
PALB2-202ENST00000561514 RAET1EQ8TD07 263 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 PXYLP1Q8TE99 480 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 NSUN4Q96CB9 384 aaKnown RBP10.39□□□□□ -0.75
PALB2-202ENST00000561514 HMG20BQ9P0W2 317 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 AGTPBP1Q9UPW5 1226 aa10.39□□□□□ -0.75
PALB2-202ENST00000561514 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
PALB2-202ENST00000561514 TRIM27P14373 513 aa10.38□□□□□ -0.75
PALB2-202ENST00000561514 FAM110CQ1W6H9 321 aa10.38□□□□□ -0.75
PALB2-202ENST00000561514 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
PALB2-202ENST00000561514 SPATA5Q8NB90 893 aa10.38□□□□□ -0.75
PALB2-202ENST00000561514 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
PALB2-202ENST00000561514 OSBPL5Q9H0X9 879 aaPredicted RBP10.38□□□□□ -0.75
PALB2-202ENST00000561514 ABCF2Q9UG63 623 aa10.38□□□□□ -0.75
PALB2-202ENST00000561514 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
PALB2-202ENST00000561514 UBXN2AP68543 259 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 GSTO1P78417 241 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 SH3D19Q5HYK7 790 aa10.37□□□□□ -0.75
PALB2-202ENST00000561514 PI16Q6UXB8 463 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms