RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 ANGEL1Q9UNK9 670 aaKnown RBP17.31■□□□□ 0.36
USP3-221ENST00000561442 MYO5AQ9Y4I1 1855 aaKnown RBP17.31■□□□□ 0.36
USP3-221ENST00000561442 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
USP3-221ENST00000561442 USP5P45974 858 aa17.3■□□□□ 0.36
USP3-221ENST00000561442 GRM1Q13255 1194 aa17.3■□□□□ 0.36
USP3-221ENST00000561442 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
USP3-221ENST00000561442 ARMC9Q7Z3E5 817 aa17.3■□□□□ 0.36
USP3-221ENST00000561442 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
USP3-221ENST00000561442 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
USP3-221ENST00000561442 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
USP3-221ENST00000561442 SAP30BPQ9UHR5 308 aaKnown RBP17.3■□□□□ 0.36
USP3-221ENST00000561442 ECM29Q5VYK3 1845 aa17.3■□□□□ 0.36
USP3-221ENST00000561442 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
USP3-221ENST00000561442 FLT1P17948 1338 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 DDTLA6NHG4 134 aaPredicted RBP17.29■□□□□ 0.36
USP3-221ENST00000561442 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 PPP1R12BO60237 982 aaPredicted RBP17.29■□□□□ 0.36
USP3-221ENST00000561442 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
USP3-221ENST00000561442 SLURP2P0DP57 97 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 FKBP1BP68106 108 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 SLC4A8Q2Y0W8 1093 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 CSRNP1Q96S65 589 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
USP3-221ENST00000561442 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
USP3-221ENST00000561442 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
USP3-221ENST00000561442 DEFB115Q30KQ5 88 aa17.28■□□□□ 0.36
USP3-221ENST00000561442 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
USP3-221ENST00000561442 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
USP3-221ENST00000561442 APPBP2Q92624 585 aa17.28■□□□□ 0.36
USP3-221ENST00000561442 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
USP3-221ENST00000561442 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
USP3-221ENST00000561442 CRNKL1Q9BZJ0 848 aaKnown RBP17.28■□□□□ 0.36
USP3-221ENST00000561442 M0R2C6 588 aa17.27■□□□□ 0.36
USP3-221ENST00000561442 PRKAB2O43741 272 aa17.27■□□□□ 0.36
USP3-221ENST00000561442 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
USP3-221ENST00000561442 IREB2P48200 963 aaKnown RBP17.27■□□□□ 0.36
USP3-221ENST00000561442 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
USP3-221ENST00000561442 DNAJC5GQ8N7S2 189 aa17.27■□□□□ 0.36
USP3-221ENST00000561442 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
USP3-221ENST00000561442 PAPPA2Q9BXP8 1791 aa17.27■□□□□ 0.35
USP3-221ENST00000561442 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.35
USP3-221ENST00000561442 VEGFBP49765 207 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 ZNF157P51786 506 aaPredicted RBP17.26■□□□□ 0.35
USP3-221ENST00000561442 DCAF15Q66K64 600 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
USP3-221ENST00000561442 ZMYM1Q5SVZ6 1142 aa17.25■□□□□ 0.35
USP3-221ENST00000561442 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
USP3-221ENST00000561442 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
USP3-221ENST00000561442 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
USP3-221ENST00000561442 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
USP3-221ENST00000561442 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
USP3-221ENST00000561442 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
USP3-221ENST00000561442 GPAA1O43292 621 aa17.24■□□□□ 0.35
USP3-221ENST00000561442 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
USP3-221ENST00000561442 CCDC129Q6ZRS4 1044 aa17.24■□□□□ 0.35
USP3-221ENST00000561442 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
USP3-221ENST00000561442 FAM227BQ96M60 508 aa17.24■□□□□ 0.35
USP3-221ENST00000561442 STRBPQ96SI9 672 aaKnown RBP17.24■□□□□ 0.35
USP3-221ENST00000561442 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
USP3-221ENST00000561442 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 AOC2O75106 756 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 SDSP20132 328 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 MAP3K9P80192 1104 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
USP3-221ENST00000561442 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
USP3-221ENST00000561442 RASAL3Q86YV0 1011 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP3-221ENST00000561442 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
USP3-221ENST00000561442 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 DCP1AQ9NPI6 582 aaPredicted RBP17.23■□□□□ 0.35
USP3-221ENST00000561442 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 PCNTO95613 3336 aa17.23■□□□□ 0.35
USP3-221ENST00000561442 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
USP3-221ENST00000561442 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
USP3-221ENST00000561442 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 CYP2D6P10635 497 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 INPP5BP32019 993 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 ECE1P42892 770 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 EVX2Q03828 476 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 VGLL4Q14135 290 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.22■□□□□ 0.35
USP3-221ENST00000561442 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
USP3-221ENST00000561442 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
USP3-221ENST00000561442 ATP8A2Q9NTI2 1148 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
USP3-221ENST00000561442 SLC10A3P09131 477 aa17.21■□□□□ 0.35
USP3-221ENST00000561442 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
USP3-221ENST00000561442 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
USP3-221ENST00000561442 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
USP3-221ENST00000561442 CSADQ9Y600 493 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms