RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ACSBG1Q96GR2 724 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 CRELD1Q96HD1 420 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 SEMA6CQ9H3T2 930 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 PCDHGC5Q9Y5F6 944 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 AK5Q9Y6K8 562 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 PDS5BQ9NTI5 1447 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 DCDC2CA8MYV0 355 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 F13BP05160 661 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 CTSHP09668 335 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 CDK8P49336 464 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 ZNF252P-AS1Q0IIN9 211 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 PCNX4Q63HM2 1172 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.93□□□□□ -1.46
HERC1-215ENST00000561436 UBE3DQ7Z6J8 389 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 ZDHHC13Q8IUH4 622 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 TMEM87AQ8NBN3 555 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 FANCD2OSQ96PS1 177 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 DISC1Q9NRI5 854 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 SMARCA2P51531 1590 aa5.93□□□□□ -1.46
HERC1-215ENST00000561436 FAM170BA6NMN3 283 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 RECKO95980 971 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 NEFMP07197 916 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 HOXA10P31260 410 aaPredicted RBP5.92□□□□□ -1.46
HERC1-215ENST00000561436 ID3Q02535 119 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 CDK5R2Q13319 367 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 TTLL4Q14679 1199 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 XP32Q5T750 250 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 BACH2Q9BYV9 841 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 ACSS3Q9H6R3 686 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 METTL5Q9NRN9 209 aaKnown RBP5.92□□□□□ -1.46
HERC1-215ENST00000561436 CRIM1Q9NZV1 1036 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 HIF3AQ9Y2N7 669 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 HMGXB3Q12766 1538 aa5.92□□□□□ -1.46
HERC1-215ENST00000561436 RNGTTO60942 597 aaKnown RBP5.91□□□□□ -1.46
HERC1-215ENST00000561436 CCDC85BQ15834 202 aaPredicted RBP5.91□□□□□ -1.46
HERC1-215ENST00000561436 PPM1JQ5JR12 505 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 LLGL2Q6P1M3 1020 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 C12orf40Q86WS4 652 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 TBC1D32Q96NH3 1257 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 DBNDD2Q9BQY9 259 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 ZFYVE1Q9HBF4 777 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 PRKAG2Q9UGJ0 569 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 PPM1HQ9ULR3 514 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 PCDHB5Q9Y5E4 795 aa5.91□□□□□ -1.46
HERC1-215ENST00000561436 PRR19A6NJB7 356 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 HYAL3O43820 417 aaPredicted RBP5.9□□□□□ -1.46
HERC1-215ENST00000561436 SEPT6Q14141 434 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 HP1BP3Q5SSJ5 553 aaPredicted RBP5.9□□□□□ -1.46
HERC1-215ENST00000561436 PAOXQ6QHF9 649 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 GATA6Q92908 595 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 CEP44Q9C0F1 390 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 PIDD1Q9HB75 910 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 KRT82Q9NSB4 513 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 RNF112Q9ULX5 631 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 PCDHA4Q9UN74 947 aa5.9□□□□□ -1.46
HERC1-215ENST00000561436 SLFN14P0C7P3 912 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 ZNF76P36508 570 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 INPP5AQ14642 412 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 TTBK2Q6IQ55 1244 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 EZH1Q92800 747 aaPredicted RBP5.89□□□□□ -1.47
HERC1-215ENST00000561436 RNF34Q969K3 372 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 ISL2Q96A47 359 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 GSX1Q9H4S2 264 aaPredicted RBP5.89□□□□□ -1.47
HERC1-215ENST00000561436 C1GALT1Q9NS00 363 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 TLR6Q9Y2C9 796 aa5.89□□□□□ -1.47
HERC1-215ENST00000561436 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.88□□□□□ -1.47
HERC1-215ENST00000561436 ADAMTS4O75173 837 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 LRP8Q14114 963 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 ZC3H12AQ5D1E8 599 aaKnown RBP5.88□□□□□ -1.47
HERC1-215ENST00000561436 ARTNQ5T4W7 220 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 LRFN4Q6PJG9 635 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 SEZ6L2Q6UXD5 910 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 ZNF765Q7L2R6 523 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 GAL3ST3Q96A11 431 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 EMILIN2Q9BXX0 1053 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 LRRC4CQ9HCJ2 640 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 ZFP64Q9NPA5 681 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 IGSF5Q9NSI5 407 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 U3KQE9 123 aa5.88□□□□□ -1.47
HERC1-215ENST00000561436 PRAMEF27A3QJZ7 478 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 EIF4EBP3O60516 100 aaPredicted RBP5.87□□□□□ -1.47
HERC1-215ENST00000561436 LEFTY1O75610 366 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 ERCC5P28715 1186 aaPredicted RBP5.87□□□□□ -1.47
HERC1-215ENST00000561436 NTF4P34130 210 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 ST13P50502 369 aaKnown RBP5.87□□□□□ -1.47
HERC1-215ENST00000561436 TAF1CQ15572 869 aaPredicted RBP5.87□□□□□ -1.47
HERC1-215ENST00000561436 SV2BQ7L1I2 683 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 ZAR1Q86SH2 424 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 SMYD4Q8IYR2 804 aaPredicted RBP5.87□□□□□ -1.47
HERC1-215ENST00000561436 PLPPR2Q96GM1 343 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 YIPF2Q9BWQ6 316 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 OSBPL1AQ9BXW6 950 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 ATXN3LQ9H3M9 355 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 PCMTD2Q9NV79 361 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 CACNA2D2Q9NY47 1150 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 CADPSQ9ULU8 1353 aa5.87□□□□□ -1.47
HERC1-215ENST00000561436 BAZ1BQ9UIG0 1483 aaKnown RBP5.86□□□□□ -1.47
HERC1-215ENST00000561436 GSC2O15499 205 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms