RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 PSAPL1Q6NUJ1 521 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 HSH2DQ96JZ2 352 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 ANKIB1Q9P2G1 1089 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 MTMR7Q9Y216 660 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 SBNO1A3KN83 1393 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 CEP162Q5TB80 1403 aa4.85□□□□□ -1.63
SPG11-225ENST00000561391 RRBP1Q9P2E9 1410 aaKnown RBP4.85□□□□□ -1.63
SPG11-225ENST00000561391 COL14A1Q05707 1796 aaKnown RBP4.85□□□□□ -1.63
SPG11-225ENST00000561391 KIAA1210Q9ULL0 1709 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 NAIPQ13075 1403 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 KIAA0232Q92628 1395 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 PATL2C9JE40 543 aaKnown RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 PTCD1O75127 700 aaKnown RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 RGS9O75916 674 aaPredicted RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 AFF1P51825 1210 aaKnown RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 ZNF211Q13398 564 aaPredicted RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 MTMR3Q13615 1198 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 DDB1Q16531 1140 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 ALDH16A1Q8IZ83 802 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 MARCH10Q8NA82 808 aaPredicted RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 GTF3C2Q8WUA4 911 aaPredicted RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 WFDC12Q8WWY7 111 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 PNMA5Q96PV4 448 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 PHACTR1Q9C0D0 580 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 SAP130Q9H0E3 1048 aa4.84□□□□□ -1.63
SPG11-225ENST00000561391 GZF1Q9H116 711 aaPredicted RBP4.84□□□□□ -1.63
SPG11-225ENST00000561391 OVOS2A0A0G2JMS6 1433 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 OVOS2A0A0J9YW53 1432 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 HFM1A2PYH4 1435 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 OVOS2Q6IE36 1432 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 TYRO3Q06418 890 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 MSL1Q68DK7 614 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 C16orf46Q6P387 395 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 PRR23CQ6ZRP0 262 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 STAG2Q8N3U4 1231 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 SMC1BQ8NDV3 1235 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 HIRIP3Q9BW71 556 aaPredicted RBP4.83□□□□□ -1.64
SPG11-225ENST00000561391 DNAJB12Q9NXW2 375 aaKnown RBP4.83□□□□□ -1.64
SPG11-225ENST00000561391 TFCP2L1Q9NZI6 479 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 CD2APQ9Y5K6 639 aa4.83□□□□□ -1.64
SPG11-225ENST00000561391 PNPLA7Q6ZV29 1317 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 NOS3P29474 1203 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 KCNQ4P56696 695 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 DGKZQ13574 1117 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 AAMPQ13685 434 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 COX20Q5RI15 118 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 NUTM2GQ5VZR2 741 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 ARHGAP27Q6ZUM4 889 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 DTWD1Q8N5C7 304 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 ACSBG1Q96GR2 724 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 MEGF10Q96KG7 1140 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 KLK14Q9P0G3 267 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 BIN2Q9UBW5 565 aaPredicted RBP4.82□□□□□ -1.64
SPG11-225ENST00000561391 LRFN2Q9ULH4 789 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 THRAP3Q9Y2W1 955 aaKnown RBP4.82□□□□□ -1.64
SPG11-225ENST00000561391 RNF114Q9Y508 228 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 ARHGEF28Q8N1W1 1705 aaKnown RBP4.82□□□□□ -1.64
SPG11-225ENST00000561391 ABCA3Q99758 1704 aa4.82□□□□□ -1.64
SPG11-225ENST00000561391 SBF2Q86WG5 1849 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 IGSF1Q8N6C5 1336 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 H3BRB1 525 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 FSTP19883 344 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 FBXO11Q86XK2 927 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 COL26A1Q96A83 441 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 TUT1Q9H6E5 874 aaKnown RBP4.81□□□□□ -1.64
SPG11-225ENST00000561391 NAGPAQ9UK23 515 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 GNEQ9Y223 722 aaKnown RBP4.81□□□□□ -1.64
SPG11-225ENST00000561391 RGPD3A6NKT7 1758 aaPredicted RBP4.81□□□□□ -1.64
SPG11-225ENST00000561391 RGPD4Q7Z3J3 1758 aa4.81□□□□□ -1.64
SPG11-225ENST00000561391 SSH2Q76I76 1423 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 TAL1P17542 331 aaPredicted RBP4.8□□□□□ -1.64
SPG11-225ENST00000561391 HIRAP54198 1017 aaPredicted RBP4.8□□□□□ -1.64
SPG11-225ENST00000561391 FKBP4Q02790 459 aaKnown RBP eCLIP4.8□□□□□ -1.64
SPG11-225ENST00000561391 RTN1Q16799 776 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 C1orf53Q5VUE5 145 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 FAM35AQ86V20 835 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 WFDC8Q8IUA0 241 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 GLYCTKQ8IVS8 523 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 ZNF280CQ8ND82 737 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 SUSD3Q96L08 255 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 RGPD8O14715 1765 aaPredicted RBP4.8□□□□□ -1.64
SPG11-225ENST00000561391 MYOM3Q5VTT5 1437 aa4.8□□□□□ -1.64
SPG11-225ENST00000561391 PLEKHH1Q9ULM0 1364 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 CDC42BPGQ6DT37 1551 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 KDM2BQ8NHM5 1336 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 SOWAHDA6NJG2 315 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 HSPA8P11142 646 aaKnown RBP4.79□□□□□ -1.64
SPG11-225ENST00000561391 CPB1P15086 417 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 NFKB1P19838 968 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 CD97P48960 835 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 HIF1AQ16665 826 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 C11orf91Q3C1V1 193 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 C9orf131Q5VYM1 1079 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 IGF2-ASQ6U949 168 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 COL23A1Q86Y22 540 aaPredicted RBP4.79□□□□□ -1.64
SPG11-225ENST00000561391 HELQQ8TDG4 1101 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 IFT43Q96FT9 208 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 EFCC1Q9HA90 598 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 PODXL2Q9NZ53 605 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms