RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 IDI2Q9BXS1 227 aa21.13■□□□□ 0.97
CDC42BPB-208ENST00000561271 DDX4Q9NQI0 724 aaKnown RBP21.13■□□□□ 0.97
CDC42BPB-208ENST00000561271 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
CDC42BPB-208ENST00000561271 ENTPD3O75355 529 aa21.12■□□□□ 0.97
CDC42BPB-208ENST00000561271 CCDC158Q5M9N0 1113 aa21.12■□□□□ 0.97
CDC42BPB-208ENST00000561271 ERO1BQ86YB8 467 aa21.12■□□□□ 0.97
CDC42BPB-208ENST00000561271 RBBP6Q7Z6E9 1792 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-208ENST00000561271 LOC285556D6RIA3 1793 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 GPR75-ASB3A0A0A6YYF3 556 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 GTF2A2P52657 109 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 OTUD7BQ6GQQ9 843 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 SH3BP5LQ7L8J4 393 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 EAF2Q96CJ1 260 aaPredicted RBP21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 CCDC8Q9H0W5 538 aaPredicted RBP21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 LRP2BPQ9P2M1 347 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 DDX19BQ9UMR2 479 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 HTTP42858 3142 aa21.11■□□□□ 0.97
CDC42BPB-208ENST00000561271 DDX60LQ5H9U9 1706 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 IRF6O14896 467 aa21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 RHBDL3P58872 404 aa21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 GSTO1P78417 241 aa21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 PPIL2Q13356 520 aa21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 ZSCAN29Q8IWY8 852 aaPredicted RBP21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 ZNF112Q9UJU3 913 aa21.1■□□□□ 0.97
CDC42BPB-208ENST00000561271 COL2A1P02458 1487 aaPredicted RBP21.09■□□□□ 0.97
CDC42BPB-208ENST00000561271 DDTLA6NHG4 134 aaPredicted RBP21.09■□□□□ 0.97
CDC42BPB-208ENST00000561271 SLURP2P0DP57 97 aa21.09■□□□□ 0.97
CDC42BPB-208ENST00000561271 FAM43AQ8N2R8 423 aa21.09■□□□□ 0.97
CDC42BPB-208ENST00000561271 PDE4DIPQ5VU43 2346 aa21.09■□□□□ 0.97
CDC42BPB-208ENST00000561271 CYP2E1P05181 493 aaPredicted RBP21.08■□□□□ 0.97
CDC42BPB-208ENST00000561271 LDHCP07864 332 aa21.08■□□□□ 0.97
CDC42BPB-208ENST00000561271 ERC1Q8IUD2 1116 aa21.08■□□□□ 0.97
CDC42BPB-208ENST00000561271 BAZ2AQ9UIF9 1905 aaKnown RBP21.08■□□□□ 0.96
CDC42BPB-208ENST00000561271 KIAA0100Q14667 2235 aaKnown RBP21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 ZAP70P43403 619 aa21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 SNAPC2Q13487 334 aa21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 TAF1CQ15572 869 aaPredicted RBP21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 NOL9Q5SY16 702 aaKnown RBP21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 C20orf194Q5TEA3 1177 aa21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 NAA16Q6N069 864 aaPredicted RBP21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 AACSQ86V21 672 aa21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 ZBTB40Q9NUA8 1239 aa21.07■□□□□ 0.96
CDC42BPB-208ENST00000561271 APBB1O00213 710 aa21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 CETPP11597 493 aa21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 PPATQ06203 517 aa21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 IL1RAPL2Q9NP60 686 aa21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 PIH1D3Q9NQM4 214 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 HPS5Q9UPZ3 1129 aa21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 NDUFB9Q9Y6M9 179 aa21.06■□□□□ 0.96
CDC42BPB-208ENST00000561271 DOCK3Q8IZD9 2030 aa21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 PKN2Q16513 984 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 ADGRA1Q86SQ6 560 aa21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 SIRT2Q8IXJ6 389 aa21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 TEX11Q8IYF3 940 aa21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 CD99L2Q8TCZ2 262 aa21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 SH3RF3Q8TEJ3 882 aaPredicted RBP21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 NOL10Q9BSC4 688 aaKnown RBP21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 AATFQ9NY61 560 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 TNRC18O15417 2968 aaPredicted RBP21.05■□□□□ 0.96
CDC42BPB-208ENST00000561271 CENPFP49454 3210 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 FAM196BA6NMK8 535 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 PHF20L1A8MW92 1017 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 BTBD19C9JJ37 291 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 SOX10P56693 466 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 RHPN1Q8TCX5 695 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 OSBPL5Q9H0X9 879 aaPredicted RBP21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 TRIM17Q9Y577 477 aa21.04■□□□□ 0.96
CDC42BPB-208ENST00000561271 HMMRO75330 724 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 NPM3O75607 178 aaKnown RBP21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 HSP90AB4PQ58FF6 505 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 FBXO46Q6PJ61 603 aaPredicted RBP21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 OTOP1Q7RTM1 612 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 RPAP2Q8IXW5 612 aaPredicted RBP21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 SCYL3Q8IZE3 742 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 ERO1AQ96HE7 468 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 ZFYVE28Q9HCC9 887 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 KCNH4Q9UQ05 1017 aa21.03■□□□□ 0.96
CDC42BPB-208ENST00000561271 MAP4K4O95819 1239 aaPredicted RBP21.02■□□□□ 0.96
CDC42BPB-208ENST00000561271 CAP1Q01518 475 aa21.02■□□□□ 0.96
CDC42BPB-208ENST00000561271 SP3Q02447 781 aa21.02■□□□□ 0.96
CDC42BPB-208ENST00000561271 BCL11AQ9H165 835 aa21.02■□□□□ 0.96
CDC42BPB-208ENST00000561271 IDH1O75874 414 aaKnown RBP21.01■□□□□ 0.95
CDC42BPB-208ENST00000561271 MAP3K10Q02779 954 aa21.01■□□□□ 0.95
CDC42BPB-208ENST00000561271 PICK1Q9NRD5 415 aa21.01■□□□□ 0.95
CDC42BPB-208ENST00000561271 BAG3O95817 575 aa21■□□□□ 0.95
CDC42BPB-208ENST00000561271 PDE3AQ14432 1141 aa21■□□□□ 0.95
CDC42BPB-208ENST00000561271 KIF1BPQ96EK5 621 aa21■□□□□ 0.95
CDC42BPB-208ENST00000561271 CHMP4BQ9H444 224 aaKnown RBP21■□□□□ 0.95
CDC42BPB-208ENST00000561271 ANTXR1Q9H6X2 564 aa21■□□□□ 0.95
CDC42BPB-208ENST00000561271 ZCCHC17Q9NP64 241 aaKnown RBP21■□□□□ 0.95
CDC42BPB-208ENST00000561271 PLCG2P16885 1265 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 PTPRAP18433 802 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 CYP7A1P22680 504 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 RGS19P49795 217 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 MOGSQ13724 837 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 CCDC84Q86UT8 332 aaPredicted RBP20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 MAPKAPK5Q8IW41 473 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms