RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 MYH2Q9UKX2 1941 aa16.47■□□□□ 0.23
SHF-210ENST00000561239 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
SHF-210ENST00000561239 TRPA1O75762 1119 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 PLCG2P16885 1265 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 NFIAQ12857 509 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 PI4K2BQ8TCG2 481 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 CLMNQ96JQ2 1002 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 FAM198AQ9UFP1 575 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 TSKSQ9UJT2 592 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 RFX7Q2KHR2 1363 aa16.46■□□□□ 0.23
SHF-210ENST00000561239 RGS3P49796 1198 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 VGLL4Q14135 290 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
SHF-210ENST00000561239 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
SHF-210ENST00000561239 CHD1LQ86WJ1 897 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 OPTNQ96CV9 577 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
SHF-210ENST00000561239 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.45■□□□□ 0.22
SHF-210ENST00000561239 MYO5AQ9Y4I1 1855 aaKnown RBP16.44■□□□□ 0.22
SHF-210ENST00000561239 MX1P20591 662 aa16.44■□□□□ 0.22
SHF-210ENST00000561239 MAP3K12Q12852 859 aa16.44■□□□□ 0.22
SHF-210ENST00000561239 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
SHF-210ENST00000561239 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
SHF-210ENST00000561239 ELP3Q9H9T3 547 aa16.44■□□□□ 0.22
SHF-210ENST00000561239 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
SHF-210ENST00000561239 GOLIM4O00461 696 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
SHF-210ENST00000561239 RHBDL3P58872 404 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 PICALMQ13492 652 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 ADGRA1Q86SQ6 560 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 EDC3Q96F86 508 aaKnown RBP16.43■□□□□ 0.22
SHF-210ENST00000561239 LNPKQ9C0E8 428 aa16.43■□□□□ 0.22
SHF-210ENST00000561239 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
SHF-210ENST00000561239 GLRX3O76003 335 aaKnown RBP16.42■□□□□ 0.22
SHF-210ENST00000561239 GTF2A2P52657 109 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 PDE1AP54750 535 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 PPP4CP60510 307 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 DNAJC2Q99543 621 aaKnown RBP16.42■□□□□ 0.22
SHF-210ENST00000561239 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 OSBPL3Q9H4L5 887 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
SHF-210ENST00000561239 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
SHF-210ENST00000561239 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
SHF-210ENST00000561239 SPDYE5A6NIY4 337 aa16.41■□□□□ 0.22
SHF-210ENST00000561239 NOM1Q5C9Z4 860 aaKnown RBP16.41■□□□□ 0.22
SHF-210ENST00000561239 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
SHF-210ENST00000561239 TEX11Q8IYF3 940 aa16.41■□□□□ 0.22
SHF-210ENST00000561239 CFHR5Q9BXR6 569 aa16.41■□□□□ 0.22
SHF-210ENST00000561239 ERC2O15083 957 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 PDE6AP16499 860 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 CYP7A1P22680 504 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 PPATQ06203 517 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
SHF-210ENST00000561239 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
SHF-210ENST00000561239 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHF-210ENST00000561239 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
SHF-210ENST00000561239 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
SHF-210ENST00000561239 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 TBC1D12O60347 775 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 PDE4AP27815 886 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 GJA5P36382 358 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 MAP3K10Q02779 954 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 PPIL2Q13356 520 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 NOL9Q5SY16 702 aaKnown RBP16.39■□□□□ 0.21
SHF-210ENST00000561239 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 SH3RF3Q8TEJ3 882 aaPredicted RBP16.39■□□□□ 0.21
SHF-210ENST00000561239 OSBPL5Q9H0X9 879 aaPredicted RBP16.39■□□□□ 0.21
SHF-210ENST00000561239 DDX4Q9NQI0 724 aaKnown RBP16.39■□□□□ 0.21
SHF-210ENST00000561239 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
SHF-210ENST00000561239 COL2A1P02458 1487 aaPredicted RBP16.39■□□□□ 0.21
SHF-210ENST00000561239 DDTLA6NHG4 134 aaPredicted RBP16.38■□□□□ 0.21
SHF-210ENST00000561239 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 CETPP11597 493 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 ADD2P35612 726 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 SLC9C2Q5TAH2 1124 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 RIOK1Q9BRS2 568 aaKnown RBP16.38■□□□□ 0.21
SHF-210ENST00000561239 PICK1Q9NRD5 415 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
SHF-210ENST00000561239 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
SHF-210ENST00000561239 INPP5BP32019 993 aa16.37■□□□□ 0.21
SHF-210ENST00000561239 UBE3CQ15386 1083 aa16.37■□□□□ 0.21
SHF-210ENST00000561239 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
SHF-210ENST00000561239 MS4A4AQ96JQ5 239 aa16.37■□□□□ 0.21
SHF-210ENST00000561239 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms