RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SPATS2Q86XZ4 545 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 TRIM42Q8IWZ5 723 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 DRC7Q8IY82 874 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TCEAL8Q8IYN2 117 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 REXO1Q8N1G1 1221 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 CCDC89Q8N998 374 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 C19orf47Q8N9M1 422 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 ZBTB38Q8NAP3 1195 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 C3orf58Q8NDZ4 430 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 VPS37AQ8NEZ2 397 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ASAP3Q8TDY4 903 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ANKRD24Q8TF21 1146 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 FBXO41Q8TF61 875 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ZDHHC1Q8WTX9 485 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 JPH3Q8WXH2 748 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 TTC17Q96AE7 1141 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ZNF512BQ96KM6 892 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 TTC1Q99614 292 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TM9SF2Q99805 663 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 SELENOOQ9BVL4 669 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 EMILIN2Q9BXX0 1053 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 PUS7LQ9H0K6 701 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 TNKS2Q9H2K2 1166 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 CASS4Q9NQ75 786 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 KCNQ5Q9NR82 932 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 MAP3K20Q9NYL2 800 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 KANSL3Q9P2N6 904 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 IP6K2Q9UHH9 426 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ZNRF3Q9ULT6 936 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 RABGAP1Q9Y3P9 1069 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 PCDHB14Q9Y5E9 798 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 MRFAP1Q9Y605 127 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 USP3Q9Y6I4 520 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TRBV23-1A0A0A0MS06 115 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 A0A1W2PQH9 124 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 DYTNA2CJ06 578 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 EXOC5O00471 708 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 CD2BP2O95400 341 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 S1PR4O95977 384 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 ADH1CP00326 375 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 F2P00734 622 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 FGAP02671 866 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 PSAPP07602 524 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 VCAM1P19320 739 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 TFE3P19532 575 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 GUCY2CP25092 1073 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 L1CAMP32004 1257 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 TXLNAP40222 546 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 SCNN1BP51168 640 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 NEK3P51956 506 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 SLC7A5Q01650 507 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 POU5F1Q01860 360 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 CLCQ05315 142 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 TRIM32Q13049 653 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 CHAF1AQ13111 956 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 TCIRG1Q13488 830 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 SAFBQ15424 915 aaKnown RBP eCLIP2.51□□□□□ -2.01
RTF1-207ENST00000561076 PDCD2Q16342 344 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 PTPN21Q16825 1174 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 GNPTABQ3T906 1256 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 ACBD5Q5T8D3 534 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 EFCAB2Q5VUJ9 269 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 NXNQ6DKJ4 435 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 IL31Q6EBC2 164 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 KIAA1211LQ6NV74 962 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 POTEAQ6S8J7 498 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 NYAP1Q6ZVC0 841 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 KRT25Q7Z3Z0 450 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 BTLAQ7Z6A9 289 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 RNF180Q86T96 592 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 C11orf74Q86VG3 221 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 MYLK4Q86YV6 388 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 IFNL2Q8IZJ0 200 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 MAGEB6Q8N7X4 407 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 RBBP8NLQ8NC74 664 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 OR2W6PQ8NHA6 318 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 FBXO27Q8NI29 283 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 PI4K2BQ8TCG2 481 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 CLIP3Q96DZ5 547 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 HSH2DQ96JZ2 352 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 CAMKK2Q96RR4 588 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 OSMRQ99650 979 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 ELAC2Q9BQ52 826 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 HERPUD2Q9BSE4 406 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 DHRS4Q9BTZ2 278 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 TARS2Q9BW92 718 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 LRRC3Q9BY71 257 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 ASPSCR1Q9BZE9 553 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 INO80BQ9C086 356 aaPredicted RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 CDH19Q9H159 772 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 PHAXQ9H814 394 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 IL21Q9HBE4 155 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 AS3MTQ9HBK9 375 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 NCOA5Q9HCD5 579 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 TMEM39AQ9NV64 488 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 INTS7Q9NVH2 962 aaKnown RBP2.51□□□□□ -2.01
RTF1-207ENST00000561076 WBP1LQ9NX94 342 aa2.51□□□□□ -2.01
RTF1-207ENST00000561076 ZDHHC3Q9NYG2 299 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms