RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 POLR3GO15318 223 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 MMP14P50281 582 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 CCT2P78371 535 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 UBE3CQ15386 1083 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 MNS1Q8NEH6 495 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 NAT10Q9H0A0 1025 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 SALL1Q9NSC2 1324 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 TADA3O75528 432 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 MB21D2Q8IYB1 491 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 SMARCC1Q92922 1105 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 NCOA5Q9HCD5 579 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 DNAI1Q9UI46 699 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 BCORQ6W2J9 1755 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 RTL9Q8NET4 1388 aa16.07■□□□□ 0.16
RABGGTA-220ENST00000560998 NTSR2O95665 410 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 SLC5A1P13866 664 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 ETF1P62495 437 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 C11orf57Q6ZUT1 292 aaPredicted RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 CEP57L1Q8IYX8 460 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 SEC31BQ9NQW1 1179 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 CFAP45Q9UL16 551 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 RRP15Q9Y3B9 282 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 DOCK2Q92608 1830 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 TCRBV5S4A2TA0A5A2 114 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 ZNF213O14771 459 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 NPHP1O15259 732 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 PRC1O43663 620 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 IDH1O75874 414 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 PDE6AP16499 860 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 SMC1AQ14683 1233 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 CCDC152Q4G0S7 254 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 C10orf67Q8IYJ2 551 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 GPHNQ9NQX3 736 aaPredicted RBP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 NIP7Q9Y221 180 aaKnown RBP eCLIP16.06■□□□□ 0.16
RABGGTA-220ENST00000560998 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 KCNQ2O43526 872 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 ST5P78524 1137 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 JAKMIP3Q5VZ66 844 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
RABGGTA-220ENST00000560998 RPS6KA5O75582 802 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 TBC1D8O95759 1140 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 ACTN2P35609 894 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 ANTXR2P58335 489 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 GPR161Q8N6U8 529 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 SPATA5Q8NB90 893 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 GUCY2CP25092 1073 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 MYCBPQ99417 103 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 NCAPGQ9BPX3 1015 aa16.04■□□□□ 0.16
RABGGTA-220ENST00000560998 SNAP23O00161 211 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 ADD1P35611 737 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 MAGEA9P43362 315 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 FOSBP53539 338 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 FCHSD1Q86WN1 690 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 LRRN4CLQ8ND94 238 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 CARMIL3Q8ND23 1372 aa16.03■□□□□ 0.16
RABGGTA-220ENST00000560998 IGHMBP2P38935 993 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-220ENST00000560998 PIP4K2BP78356 416 aa16.02■□□□□ 0.16
RABGGTA-220ENST00000560998 NBPF11Q86T75 865 aa16.02■□□□□ 0.16
RABGGTA-220ENST00000560998 MSL3Q8N5Y2 521 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-220ENST00000560998 ARFGAP3Q9NP61 516 aa16.02■□□□□ 0.16
RABGGTA-220ENST00000560998 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
RABGGTA-220ENST00000560998 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 FDPSP14324 419 aaKnown RBP16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 TBC1D10CQ8IV04 446 aa16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 REXO1L1PQ8IX06 675 aa16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 STRBPQ96SI9 672 aaKnown RBP16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 HPS5Q9UPZ3 1129 aa16.02■□□□□ 0.15
RABGGTA-220ENST00000560998 GOLGA8BA8MQT2 603 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 TRIM66O15016 1216 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 ALX1Q15699 326 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 AXDND1Q5T1B0 1012 aaPredicted RBP16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 ATL3Q6DD88 541 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 LINC00116Q8NCU8 138 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 COL4A1P02462 1669 aa16.01■□□□□ 0.15
RABGGTA-220ENST00000560998 TOM1O60784 492 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 APPP05067 770 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 MAP3K12Q12852 859 aa16■□□□□ 0.15
RABGGTA-220ENST00000560998 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms