RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FKBP4Q02790 459 aaKnown RBP eCLIP18.83■□□□□ 0.6
TPM1-228ENST00000560975 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 KRT40Q6A162 431 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 CDC5LQ99459 802 aaKnown RBP18.83■□□□□ 0.6
TPM1-228ENST00000560975 FAM204AQ9H8W3 233 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 USP5P45974 858 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 ANTXR2P58335 489 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 SLC35F6Q8N357 371 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.6
TPM1-228ENST00000560975 PPP6R2O75170 966 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 ABL1P00519 1130 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
TPM1-228ENST00000560975 RALYLQ86SE5 291 aaKnown RBP18.82■□□□□ 0.6
TPM1-228ENST00000560975 TNRQ92752 1358 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 LRRIQ3A6PVS8 624 aaPredicted RBP18.82■□□□□ 0.6
TPM1-228ENST00000560975 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 MYO1BO43795 1136 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 RBL2Q08999 1139 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 DENND2AQ9ULE3 1009 aa18.82■□□□□ 0.6
TPM1-228ENST00000560975 ZNF18P17022 549 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 ANKRD24Q8TF21 1146 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 CTAGE9A4FU28 777 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 FGAP02671 866 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 SART3Q15020 963 aaKnown RBP18.81■□□□□ 0.6
TPM1-228ENST00000560975 PPFIBP1Q86W92 1011 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 NOA1Q8NC60 698 aaKnown RBP18.81■□□□□ 0.6
TPM1-228ENST00000560975 MED15Q96RN5 788 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
TPM1-228ENST00000560975 UBE2Q2LH0YL09 131 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 GRIN1Q05586 938 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 TTC39AQ5SRH9 613 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 KLHL10Q6JEL2 608 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 MB21D2Q8IYB1 491 aaPredicted RBP18.8■□□□□ 0.6
TPM1-228ENST00000560975 ACRBPQ8NEB7 543 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 CTAGE15A4D2H0 777 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 CTAGE8P0CG41 777 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 STX17P56962 302 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 POSTNQ15063 836 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 CTAGE6Q86UF2 777 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 CTAGE4Q8IX94 777 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 IGSF22Q8N9C0 903 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 FAM71BQ8TC56 605 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 SERTAD1Q9UHV2 236 aa18.8■□□□□ 0.6
TPM1-228ENST00000560975 LOC102724159A0A0B4J2E5 919 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 POLR2DO15514 142 aaKnown RBP18.79■□□□□ 0.6
TPM1-228ENST00000560975 RPS6KA5O75582 802 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 NR1I3Q14994 352 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 PWP2Q15269 919 aaKnown RBP18.79■□□□□ 0.6
TPM1-228ENST00000560975 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 MKRN1Q9UHC7 482 aaKnown RBP18.79■□□□□ 0.6
TPM1-228ENST00000560975 CORO7P57737 925 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 NUTM2AQ8IVF1 878 aaPredicted RBP18.79■□□□□ 0.6
TPM1-228ENST00000560975 FOXP2O15409 715 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 MDM2Q00987 491 aaPredicted RBP18.79■□□□□ 0.6
TPM1-228ENST00000560975 E2F4Q16254 413 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 NCOA7Q8NI08 942 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 PPM1EQ8WY54 764 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 GDAP1L1Q96MZ0 367 aa18.79■□□□□ 0.6
TPM1-228ENST00000560975 HOOK1Q9UJC3 728 aaKnown RBP18.79■□□□□ 0.6
TPM1-228ENST00000560975 DIP2AQ14689 1571 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 NCAPH2Q6IBW4 605 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 ENOX1Q8TC92 643 aaKnown RBP18.78■□□□□ 0.6
TPM1-228ENST00000560975 ZNF594Q96JF6 807 aaPredicted RBP18.78■□□□□ 0.6
TPM1-228ENST00000560975 RNF40O75150 1001 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 METAP2P50579 478 aaKnown RBP eCLIP18.78■□□□□ 0.6
TPM1-228ENST00000560975 AKAP17AQ02040 695 aaKnown RBP18.78■□□□□ 0.6
TPM1-228ENST00000560975 RABL6Q3YEC7 729 aaPredicted RBP18.78■□□□□ 0.6
TPM1-228ENST00000560975 NKX2-3Q8TAU0 364 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 PANX2Q96RD6 677 aa18.78■□□□□ 0.6
TPM1-228ENST00000560975 ATP2B1P20020 1258 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 GUCY2CP25092 1073 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 LRRC24Q50LG9 513 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 ATG9AQ7Z3C6 839 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 ARHGEF25Q86VW2 580 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 YY1AP1Q9H869 796 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 SEC31BQ9NQW1 1179 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 TRDNQ13061 729 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 FBXL16Q8N461 479 aa18.77■□□□□ 0.6
TPM1-228ENST00000560975 KRI1Q8N9T8 703 aaKnown RBP18.77■□□□□ 0.6
TPM1-228ENST00000560975 RIN2Q8WYP3 895 aaPredicted RBP18.77■□□□□ 0.6
TPM1-228ENST00000560975 FAM237AA0A1B0GTK4 181 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 CASP14P31944 242 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 GPATCH11Q8N954 259 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 MLKLQ8NB16 471 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 NAPGQ99747 312 aaPredicted RBP18.76■□□□□ 0.59
TPM1-228ENST00000560975 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 GBP3Q9H0R5 595 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 SENP2Q9HC62 589 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 COBLO75128 1261 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 MICALL1Q8N3F8 863 aa18.76■□□□□ 0.59
TPM1-228ENST00000560975 PLEKHG1Q9ULL1 1385 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms