RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 PNPLA7Q6ZV29 1317 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 KCNQ2O43526 872 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
CRTC3-210ENST00000560927 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.3
CRTC3-210ENST00000560927 C3orf67Q6ZVT6 689 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 NAT10Q9H0A0 1025 aaKnown RBP16.92■□□□□ 0.3
CRTC3-210ENST00000560927 CNNM2Q9H8M5 875 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 BCL9LQ86UU0 1499 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 RTL9Q8NET4 1388 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 SMIM22K7EJ46 135 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.3
CRTC3-210ENST00000560927 SHC4Q6S5L8 630 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 LRRC8AQ8IWT6 810 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.92■□□□□ 0.3
CRTC3-210ENST00000560927 KRT23Q9C075 422 aa16.92■□□□□ 0.3
CRTC3-210ENST00000560927 TIAM2Q8IVF5 1701 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 CHD4Q14839 1912 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
CRTC3-210ENST00000560927 CLIC6Q96NY7 704 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 THRAP3Q9Y2W1 955 aaKnown RBP16.91■□□□□ 0.3
CRTC3-210ENST00000560927 RREB1Q92766 1687 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 SSRP1Q08945 709 aaKnown RBP16.91■□□□□ 0.3
CRTC3-210ENST00000560927 ISM2Q6H9L7 571 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 CCDC82Q8N4S0 544 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
CRTC3-210ENST00000560927 NACAP1Q9BZK3 213 aa16.91■□□□□ 0.3
CRTC3-210ENST00000560927 RIOK3O14730 519 aaKnown RBP16.9■□□□□ 0.3
CRTC3-210ENST00000560927 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
CRTC3-210ENST00000560927 GNAT2P19087 354 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 GYG1P46976 350 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 TRIM29Q14134 588 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 ZRSR1Q15695 479 aaKnown RBP16.9■□□□□ 0.3
CRTC3-210ENST00000560927 ABCF2Q9UG63 623 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 HPSEQ9Y251 543 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 PPP6R2O75170 966 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 IFNAR1P17181 557 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 CYP7A1P22680 504 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 SYKP43405 635 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 KCNQ4P56696 695 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 ERFEQ4G0M1 354 aa16.9■□□□□ 0.3
CRTC3-210ENST00000560927 NRAPQ86VF7 1730 aa16.89■□□□□ 0.3
CRTC3-210ENST00000560927 STK36Q9NRP7 1315 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 BCORQ6W2J9 1755 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 WTAPQ15007 396 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 SMIM5Q71RC9 77 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 NBPF11Q86T75 865 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 KCNJ14Q9UNX9 436 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 BTBD18B2RXH4 712 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 NLRP12P59046 1061 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 BPIFA3Q9BQP9 254 aa16.89■□□□□ 0.29
CRTC3-210ENST00000560927 COL1A1P02452 1464 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-210ENST00000560927 NUTM2BA6NNL0 878 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-210ENST00000560927 NUTM2EB1AL46 878 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-210ENST00000560927 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
CRTC3-210ENST00000560927 PPARAQ07869 468 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 CHAF1AQ13111 956 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-210ENST00000560927 RTN1Q16799 776 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 NUTM2AQ8IVF1 878 aaPredicted RBP16.88■□□□□ 0.29
CRTC3-210ENST00000560927 ZNF804BA4D1E1 1349 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 NID2Q14112 1375 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 NCAPHQ15003 741 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
CRTC3-210ENST00000560927 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
CRTC3-210ENST00000560927 LAMB2P55268 1798 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 MINDY4BA8MYZ0 360 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 SART3Q15020 963 aaKnown RBP16.87■□□□□ 0.29
CRTC3-210ENST00000560927 RESP18Q5W5W9 173 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 NOSTRINQ8IVI9 506 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 TAF1P21675 1872 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 MMP1P03956 469 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 TOB1P50616 345 aaPredicted RBP16.87■□□□□ 0.29
CRTC3-210ENST00000560927 CCZ1BP86790 482 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 CCZ1P86791 482 aaPredicted RBP16.87■□□□□ 0.29
CRTC3-210ENST00000560927 PNOCQ13519 176 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 LINC00116Q8NCU8 138 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 TIGD1Q96MW7 591 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.87■□□□□ 0.29
CRTC3-210ENST00000560927 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
CRTC3-210ENST00000560927 SKILP12757 684 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 SPECC1Q5M775 1068 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 ANKRD18AQ8IVF6 992 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 DIS3L2Q8IYB7 885 aaKnown RBP16.86■□□□□ 0.29
CRTC3-210ENST00000560927 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 ARID3AQ99856 593 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 XPO4Q9C0E2 1151 aaKnown RBP16.86■□□□□ 0.29
CRTC3-210ENST00000560927 CICQ96RK0 1608 aaPredicted RBP16.86■□□□□ 0.29
CRTC3-210ENST00000560927 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 FAM237AA0A1B0GTK4 181 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 ERICH2A1L162 156 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 TNNT1P13805 278 aa16.86■□□□□ 0.29
CRTC3-210ENST00000560927 TPD52L1Q16890 204 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms