RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 EIF4G3O43432 1585 aaKnown RBP6.53□□□□□ -1.36
TMOD3-207ENST00000560549 UNCXA6NJT0 531 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
TMOD3-207ENST00000560549 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 DYNC1LI2O43237 492 aaPredicted RBP6.53□□□□□ -1.36
TMOD3-207ENST00000560549 ADAMTS4O75173 837 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 F13BP05160 661 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 LDHBP07195 334 aaKnown RBP6.53□□□□□ -1.36
TMOD3-207ENST00000560549 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
TMOD3-207ENST00000560549 ADMP35318 185 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 GRIK1P39086 918 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 ALG1LQ6GMV1 187 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 TPTE2Q6XPS3 522 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 GATA6Q92908 595 aa6.53□□□□□ -1.36
TMOD3-207ENST00000560549 NECAB3Q96P71 396 aaPredicted RBP6.53□□□□□ -1.36
TMOD3-207ENST00000560549 ARHGEF11O15085 1522 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 WDR97A6NE52 1622 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 XRCC5P13010 732 aaKnown RBP6.52□□□□□ -1.37
TMOD3-207ENST00000560549 RAB6AP20340 208 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 RXRBP28702 533 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 TAGLNQ01995 201 aaKnown RBP6.52□□□□□ -1.37
TMOD3-207ENST00000560549 ZNF252P-AS1Q0IIN9 211 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 DYMQ7RTS9 669 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 FBXO33Q7Z6M2 555 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 SULF2Q8IWU5 870 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 SEMA6CQ9H3T2 930 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 C12orf49Q9H741 205 aa6.52□□□□□ -1.37
TMOD3-207ENST00000560549 ERICH3Q5RHP9 1530 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 NFICP08651 508 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 CELA3AP09093 270 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 BMP6P22004 513 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 GSTT1P30711 240 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 MSMPQ1L6U9 139 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 GRIN3AQ8TCU5 1115 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 DDX54Q8TDD1 881 aaKnown RBP6.51□□□□□ -1.37
TMOD3-207ENST00000560549 PIM2Q9P1W9 311 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
TMOD3-207ENST00000560549 AQRO60306 1485 aaKnown RBP eCLIP6.5□□□□□ -1.371e-9■■■□□ 18.6
TMOD3-207ENST00000560549 ARAP1Q96P48 1450 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.5□□□□□ -1.37
TMOD3-207ENST00000560549 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 RBM47A0AV96 593 aaKnown RBP6.5□□□□□ -1.37
TMOD3-207ENST00000560549 IGSF3O75054 1194 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 HOXA10P31260 410 aaPredicted RBP6.5□□□□□ -1.37
TMOD3-207ENST00000560549 USP11P51784 963 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 KIF4BQ2VIQ3 1234 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 SRCIN1Q9C0H9 1055 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 RAD18Q9NS91 495 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 CRIM1Q9NZV1 1036 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 ABCA10Q8WWZ4 1543 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 VPS8Q8N3P4 1428 aa6.5□□□□□ -1.37
TMOD3-207ENST00000560549 COL17A1Q9UMD9 1497 aaPredicted RBP6.49□□□□□ -1.37
TMOD3-207ENST00000560549 CARMIL1Q5VZK9 1371 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 TDRD9Q8NDG6 1382 aaKnown RBP6.49□□□□□ -1.37
TMOD3-207ENST00000560549 FOSL1P15407 271 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 NME2P22392 152 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 ATP2B2Q01814 1243 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 NFKBIBQ15653 356 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 ZAR1Q86SH2 424 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 FBXL6Q8N531 539 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 KCNB2Q92953 911 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 DUSP9Q99956 384 aaKnown RBP6.49□□□□□ -1.37
TMOD3-207ENST00000560549 YIPF2Q9BWQ6 316 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
TMOD3-207ENST00000560549 PRPF40AO75400 957 aaKnown RBP6.48□□□□□ -1.37
TMOD3-207ENST00000560549 ZNF16P17020 682 aaPredicted RBP6.48□□□□□ -1.37
TMOD3-207ENST00000560549 ERCC3P19447 782 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 ARNTP27540 789 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 ASPAP45381 313 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 RBM25P49756 843 aaKnown RBP6.48□□□□□ -1.37
TMOD3-207ENST00000560549 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
TMOD3-207ENST00000560549 MAP1SQ66K74 1059 aaPredicted RBP6.48□□□□□ -1.37
TMOD3-207ENST00000560549 MCTP1Q6DN14 999 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 GPBAR1Q8TDU6 330 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 DISC1Q9NRI5 854 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 PPP4R2Q9NY27 417 aa6.48□□□□□ -1.37
TMOD3-207ENST00000560549 OAS3Q9Y6K5 1087 aaKnown RBP6.48□□□□□ -1.37
TMOD3-207ENST00000560549 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 PRNPP04156 253 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 NEFMP07197 916 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 GNA15P30679 374 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 GIMAP7Q8NHV1 300 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 ANKRD24Q8TF21 1146 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 METTL22Q9BUU2 404 aaPredicted RBP6.47□□□□□ -1.37
TMOD3-207ENST00000560549 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 ATG3Q9NT62 314 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 KIAA1522Q9P206 1035 aaPredicted RBP6.47□□□□□ -1.37
TMOD3-207ENST00000560549 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 PPM1HQ9ULR3 514 aa6.47□□□□□ -1.37
TMOD3-207ENST00000560549 SPG7Q9UQ90 795 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms