RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 ELNP15502 786 aa17.82■□□□□ 0.44
IRF9-210ENST00000560542 SMCR8Q8TEV9 937 aaPredicted RBP17.82■□□□□ 0.44
IRF9-210ENST00000560542 FAM198AQ9UFP1 575 aa17.82■□□□□ 0.44
IRF9-210ENST00000560542 ZHX2Q9Y6X8 837 aa17.82■□□□□ 0.44
IRF9-210ENST00000560542 DOCK2Q92608 1830 aa17.82■□□□□ 0.44
IRF9-210ENST00000560542 ZBTB22O15209 634 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 ENTPD3O75355 529 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 PTPRAP18433 802 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 DIXDC1Q155Q3 683 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 NECAB2Q7Z6G3 386 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 COA7Q96BR5 231 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 GDF15Q99988 308 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 IDI2Q9BXS1 227 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 STAP2Q9UGK3 403 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 AFG3L2Q9Y4W6 797 aa17.81■□□□□ 0.44
IRF9-210ENST00000560542 LDHBP07195 334 aaKnown RBP17.8■□□□□ 0.44
IRF9-210ENST00000560542 MAP3K10Q02779 954 aa17.8■□□□□ 0.44
IRF9-210ENST00000560542 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
IRF9-210ENST00000560542 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
IRF9-210ENST00000560542 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
IRF9-210ENST00000560542 PTPRFP10586 1907 aa17.8■□□□□ 0.44
IRF9-210ENST00000560542 A0A0C4DFX4 3053 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 EYA2O00167 538 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 SEMA3EO15041 775 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 PRDX5P30044 214 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 GADL1Q6ZQY3 521 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 PAWRQ96IZ0 340 aaKnown RBP17.79■□□□□ 0.44
IRF9-210ENST00000560542 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
IRF9-210ENST00000560542 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
IRF9-210ENST00000560542 CTNND1O60716 968 aaKnown RBP17.78■□□□□ 0.44
IRF9-210ENST00000560542 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
IRF9-210ENST00000560542 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.78■□□□□ 0.44
IRF9-210ENST00000560542 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
IRF9-210ENST00000560542 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
IRF9-210ENST00000560542 ALPK3Q96L96 1907 aa17.78■□□□□ 0.44
IRF9-210ENST00000560542 PTPRCP08575 1304 aa17.77■□□□□ 0.44
IRF9-210ENST00000560542 HMGCRP04035 888 aa17.77■□□□□ 0.44
IRF9-210ENST00000560542 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
IRF9-210ENST00000560542 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.44
IRF9-210ENST00000560542 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.44
IRF9-210ENST00000560542 STXBP5LQ9Y2K9 1186 aa17.77■□□□□ 0.44
IRF9-210ENST00000560542 GAKO14976 1311 aa17.76■□□□□ 0.43
IRF9-210ENST00000560542 GCLCP48506 637 aaPredicted RBP17.76■□□□□ 0.43
IRF9-210ENST00000560542 RGS3P49796 1198 aa17.76■□□□□ 0.43
IRF9-210ENST00000560542 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
IRF9-210ENST00000560542 DEFB123Q8N688 67 aa17.76■□□□□ 0.43
IRF9-210ENST00000560542 PROCA1Q8NCQ7 364 aaPredicted RBP17.76■□□□□ 0.43
IRF9-210ENST00000560542 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
IRF9-210ENST00000560542 PHIPQ8WWQ0 1821 aa17.75■□□□□ 0.43
IRF9-210ENST00000560542 RFX5P48382 616 aaPredicted RBP17.75■□□□□ 0.43
IRF9-210ENST00000560542 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
IRF9-210ENST00000560542 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
IRF9-210ENST00000560542 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
IRF9-210ENST00000560542 NBPF3Q9H094 633 aa17.75■□□□□ 0.43
IRF9-210ENST00000560542 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 TBC1D12O60347 775 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 CIAO1O76071 339 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
IRF9-210ENST00000560542 C7orf61Q8IZ16 206 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
IRF9-210ENST00000560542 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
IRF9-210ENST00000560542 SALL2Q9Y467 1007 aaPredicted RBP17.74■□□□□ 0.43
IRF9-210ENST00000560542 PDS5AQ29RF7 1337 aaKnown RBP17.73■□□□□ 0.43
IRF9-210ENST00000560542 DOCK3Q8IZD9 2030 aa17.73■□□□□ 0.43
IRF9-210ENST00000560542 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
IRF9-210ENST00000560542 PABPC4Q13310 644 aaKnown RBP eCLIP17.73■□□□□ 0.43
IRF9-210ENST00000560542 ATP2B3Q16720 1220 aa17.73■□□□□ 0.43
IRF9-210ENST00000560542 SH3BP5LQ7L8J4 393 aa17.73■□□□□ 0.43
IRF9-210ENST00000560542 ATG9AQ7Z3C6 839 aa17.73■□□□□ 0.43
IRF9-210ENST00000560542 TDHQ8IZJ6 230 aa17.73■□□□□ 0.43
IRF9-210ENST00000560542 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
IRF9-210ENST00000560542 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
IRF9-210ENST00000560542 HMX1Q9NP08 348 aaPredicted RBP17.73■□□□□ 0.43
IRF9-210ENST00000560542 LOC285556D6RIA3 1793 aa17.72■□□□□ 0.43
IRF9-210ENST00000560542 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
IRF9-210ENST00000560542 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
IRF9-210ENST00000560542 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
IRF9-210ENST00000560542 TREML2Q5T2D2 321 aa17.71■□□□□ 0.43
IRF9-210ENST00000560542 DZIP1Q86YF9 867 aaKnown RBP17.71■□□□□ 0.43
IRF9-210ENST00000560542 OSBPL5Q9H0X9 879 aaPredicted RBP17.71■□□□□ 0.43
IRF9-210ENST00000560542 C11orf49Q9H6J7 331 aa17.71■□□□□ 0.43
IRF9-210ENST00000560542 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
IRF9-210ENST00000560542 CEP126Q9P2H0 1117 aa17.71■□□□□ 0.43
IRF9-210ENST00000560542 OGDHLQ9ULD0 1010 aa17.71■□□□□ 0.43
IRF9-210ENST00000560542 ZMYND8Q9ULU4 1186 aaPredicted RBP17.71■□□□□ 0.43
IRF9-210ENST00000560542 DDX60LQ5H9U9 1706 aaKnown RBP17.7■□□□□ 0.42
IRF9-210ENST00000560542 MAP4K4O95819 1239 aaPredicted RBP17.7■□□□□ 0.42
IRF9-210ENST00000560542 MAGEA10P43363 369 aaPredicted RBP17.7■□□□□ 0.42
IRF9-210ENST00000560542 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
IRF9-210ENST00000560542 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
IRF9-210ENST00000560542 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
IRF9-210ENST00000560542 MAP3K21Q5TCX8 1036 aa17.69■□□□□ 0.42
IRF9-210ENST00000560542 ZNF280CQ8ND82 737 aa17.69■□□□□ 0.42
IRF9-210ENST00000560542 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms