RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SH3RF3Q8TEJ3 882 aaPredicted RBP16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 APPBP2Q92624 585 aa16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 CRNKL1Q9BZJ0 848 aaKnown RBP16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 RGMBQ6NW40 437 aa16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 ANKRD13AQ8IZ07 590 aa16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
PKNOX1-209ENST00000560448 FLT1P17948 1338 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 TBC1D12O60347 775 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 GNAT2P19087 354 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 MAP3K10Q02779 954 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 TCP10Q12799 353 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 PICALMQ13492 652 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 DLK2Q6UY11 383 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 MIGA1Q8NAN2 632 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 AIDAQ96BJ3 306 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 ZNF341Q9BYN7 854 aa16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-209ENST00000560448 USP5P45974 858 aa16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 NOGQ13253 232 aa16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 ATP8A2Q9NTI2 1148 aa16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.28
PKNOX1-209ENST00000560448 HIP1O00291 1037 aa16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 USP2O75604 605 aaPredicted RBP16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 HLA-DOAP06340 250 aa16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 MAP2K2P36507 400 aa16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 AK9Q5TCS8 1911 aa16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
PKNOX1-209ENST00000560448 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 GIMAP6Q6P9H5 292 aa16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 CAPNS2Q96L46 248 aa16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 MKRN1Q9UHC7 482 aaKnown RBP16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 CSADQ9Y600 493 aa16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 WDR33Q9C0J8 1336 aaKnown RBP16.81■□□□□ 0.28
PKNOX1-209ENST00000560448 TRIM6-TRIM34B2RNG4 842 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 SLC10A3P09131 477 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 DYNLL1P63167 89 aaKnown RBP16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 HTRA3P83110 453 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 AMOTL1Q8IY63 956 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 JMYQ8N9B5 988 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 EHD4Q9H223 541 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 ZNF112Q9UJU3 913 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
PKNOX1-209ENST00000560448 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 UBE2Q2LH0YL09 131 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 MBD4O95243 580 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 SH3BP5LQ7L8J4 393 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 MAPKAPK5Q8IW41 473 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 PUS7LQ9H0K6 701 aaKnown RBP16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 PDE4AP27815 886 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 VEGFBP49765 207 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 NOL9Q5SY16 702 aaKnown RBP16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 ZFPM1Q8IX07 1006 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 LCORLQ8N3X6 602 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 SLC10A4Q96EP9 437 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 WRNIP1Q96S55 665 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 STRBPQ96SI9 672 aaKnown RBP16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 GINM1Q9NU53 330 aa16.79■□□□□ 0.28
PKNOX1-209ENST00000560448 DDX60LQ5H9U9 1706 aaKnown RBP16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 PRKG1Q13976 671 aa16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 CYP4F22Q6NT55 531 aa16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 ARMT1Q9H993 441 aa16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
PKNOX1-209ENST00000560448 MYH1P12882 1939 aa16.77■□□□□ 0.28
PKNOX1-209ENST00000560448 NAV1Q8NEY1 1877 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 FAM155AB1AL88 458 aaPredicted RBP16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 GPAA1O43292 621 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms