RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 LMBRD1Q9NUN5 540 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 ANGEL1Q9UNK9 670 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 CNPY2Q9Y2B0 182 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 SH2B2O14492 632 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 BTDP43251 543 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 USP5P45974 858 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 SCNN1DP51172 638 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 CERS5Q8N5B7 392 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 CHMP4CQ96CF2 233 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 GJB4Q9NTQ9 266 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
SNRPA1-211ENST00000560433 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 TMC4Q7Z404 712 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 LY9Q9HBG7 655 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 DDX49Q9Y6V7 483 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 NMT2O60551 498 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 AOC3Q16853 763 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 CMTR1Q8N1G2 835 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 DYNLL2Q96FJ2 89 aa12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-211ENST00000560433 CDC27P30260 824 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 COA1Q9GZY4 146 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 PCDHAC2Q9Y5I4 1007 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 FIBPO43427 364 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 GADD45BO75293 160 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 STYK1Q6J9G0 422 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 APOA5Q6Q788 366 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 SMARCC2Q8TAQ2 1214 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 PHKBQ93100 1093 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 KRT23Q9C075 422 aa12.77□□□□□ -0.37
SNRPA1-211ENST00000560433 METAP2P50579 478 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 PLCD1P51178 756 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 SLC44A5Q8NCS7 719 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 GPT2Q8TD30 523 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 H3BQV1 296 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 CPLX1O14810 134 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 DPEP1P16444 411 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 EVCP57679 992 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 PICALMQ13492 652 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 FBXL16Q8N461 479 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 AIFM3Q96NN9 605 aa12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 RBM27Q9P2N5 1060 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-211ENST00000560433 CCDC69A6NI79 296 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 BAG3O95817 575 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 GSTO1P78417 241 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 KIAA0825Q8IV33 1275 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 TMEM87BQ96K49 555 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 ATP8A2Q9NTI2 1148 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 TNKSO95271 1327 aa12.75□□□□□ -0.37
SNRPA1-211ENST00000560433 WTAPQ15007 396 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 ESR2Q92731 530 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 ANAPC4Q9UJX5 808 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 SLC12A7Q9Y666 1083 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 ZBTB43O43298 467 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 ECE2O60344 883 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 MKRN1Q9UHC7 482 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
SNRPA1-211ENST00000560433 FAM205AQ6ZU69 1335 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 ERICH2A1L162 156 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 LDHCP07864 332 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 PDCP20941 246 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 695.1 ms