RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CDAN1Q8IWY9 1227 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 TRPC5Q9UL62 973 aaPredicted RBP15.13■□□□□ 0.01
TRAF3-208ENST00000560371 USP19O94966 1318 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 STX10O60499 249 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 SKILP12757 684 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 CTAGE9A4FU28 777 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
TRAF3-208ENST00000560371 CGNQ9P2M7 1197 aaKnown RBP15.13■□□□□ 0.01
TRAF3-208ENST00000560371 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
TRAF3-208ENST00000560371 KRT5P13647 590 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 TYRO3Q06418 890 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 CEP112Q8N8E3 955 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 LZTS2Q9BRK4 669 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 AZI2Q9H6S1 392 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 SPC25Q9HBM1 224 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 PAXBP1Q9Y5B6 917 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 PLEKHG3A1L390 1219 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 NSMFQ6X4W1 530 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 MAK16Q9BXY0 300 aaKnown RBP15.12■□□□□ 0.01
TRAF3-208ENST00000560371 PPP1R2P41236 205 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
TRAF3-208ENST00000560371 RAPGEF1Q13905 1077 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 KIFC2Q96AC6 838 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 TXNDC16Q9P2K2 825 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 SLC27A2O14975 620 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 CFBP00751 764 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 PZPP20742 1482 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 ELP1O95163 1332 aa15.12■□□□□ 0.01
TRAF3-208ENST00000560371 HSF2BPO75031 334 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 LLPHQ9BRT6 129 aaKnown RBP15.11■□□□□ 0.01
TRAF3-208ENST00000560371 TXKP42681 527 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 CNNM4Q6P4Q7 775 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 USP26Q9BXU7 913 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 USP40Q9NVE5 1235 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 LUC7L2Q9Y383 392 aaKnown RBP15.11■□□□□ 0.01
TRAF3-208ENST00000560371 A0A1B0GVL5 298 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
TRAF3-208ENST00000560371 EIF4A1P60842 406 aaKnown RBP15.11■□□□□ 0.01
TRAF3-208ENST00000560371 TRPC3Q13507 836 aa15.11■□□□□ 0.01
TRAF3-208ENST00000560371 ZAP70P43403 619 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 STK24Q9Y6E0 443 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 DDX39AO00148 427 aaKnown RBP15.1■□□□□ 0.01
TRAF3-208ENST00000560371 CPA1P15085 419 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 MICALCLQ6ZW33 695 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 DNM2P50570 870 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 SPECC1LQ69YQ0 1117 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 MAEAQ7L5Y9 396 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 PPM1EQ8WY54 764 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRAF3-208ENST00000560371 SERPINA10Q9UK55 444 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 FNBP4Q8N3X1 1017 aaPredicted RBP15.1■□□□□ 0.01
TRAF3-208ENST00000560371 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 SLC5A4Q9NY91 659 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 M0QZ92 97 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 PHKG2P15735 406 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
TRAF3-208ENST00000560371 ZBTB38Q8NAP3 1195 aaPredicted RBP15.09■□□□□ 0.01
TRAF3-208ENST00000560371 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 TFAP4Q01664 338 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 RNF187Q5TA31 235 aaPredicted RBP15.09■□□□□ 0.01
TRAF3-208ENST00000560371 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 DNAI1Q9UI46 699 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
TRAF3-208ENST00000560371 SIK1P57059 783 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 PDE4DQ08499 809 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 PAIP2Q9BPZ3 127 aaKnown RBP15.09■□□□□ 0.01
TRAF3-208ENST00000560371 CALCRLQ16602 461 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 SULF1Q8IWU6 871 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAF3-208ENST00000560371 SAMD9Q5K651 1589 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
TRAF3-208ENST00000560371 GAS8O95995 478 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 DCAF15Q66K64 600 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 CHURC1Q8WUH1 139 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 CTDSPL2Q05D32 466 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 CCDC14Q49A88 953 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 EXOC7Q9UPT5 735 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
TRAF3-208ENST00000560371 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0.01
TRAF3-208ENST00000560371 NLGN1Q8N2Q7 840 aa15.08■□□□□ 0.01
TRAF3-208ENST00000560371 ADCY7P51828 1080 aa15.08■□□□□ 0.01
TRAF3-208ENST00000560371 AS3MTQ9HBK9 375 aa15.08■□□□□ 0.01
TRAF3-208ENST00000560371 ATP2B4P23634 1241 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 CCDC186Q7Z3E2 898 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 NCOA5Q9HCD5 579 aaKnown RBP15.08■□□□□ 0
TRAF3-208ENST00000560371 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 AOX1Q06278 1338 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms