RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 USP17L21D6R901 530 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 DZIP1Q86YF9 867 aaKnown RBP16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 NUP133Q8WUM0 1156 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 DACT1Q9NYF0 836 aa16.46■□□□□ 0.23
CARMIL3-203ENST00000560349 ZMYM6O95789 1325 aa16.46■□□□□ 0.22
CARMIL3-203ENST00000560349 IRS2Q9Y4H2 1338 aa16.46■□□□□ 0.22
CARMIL3-203ENST00000560349 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 KIF28PB7ZC32 967 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 POLRMTO00411 1230 aaKnown RBP16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 RANBP6O60518 1105 aaKnown RBP16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 ZSCAN30Q86W11 494 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 SCAND2PQ9GZW5 306 aaPredicted RBP16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 SRCAPQ6ZRS2 3230 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
CARMIL3-203ENST00000560349 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 NR1I2O75469 434 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 TMEM87BQ96K49 555 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 ZSCAN16Q9H4T2 348 aaPredicted RBP16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 XDHP47989 1333 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 CHD4Q14839 1912 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 NMT2O60551 498 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 KRT23Q9C075 422 aa16.44■□□□□ 0.22
CARMIL3-203ENST00000560349 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 WTAPQ15007 396 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 COL23A1Q86Y22 540 aaPredicted RBP16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 ALG1Q9BT22 464 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 FBXO18Q8NFZ0 1043 aa16.43■□□□□ 0.22
CARMIL3-203ENST00000560349 CRY2Q49AN0 593 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 FAM47AQ5JRC9 791 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 MPNDQ8N594 471 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 UBAC1Q9BSL1 405 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 ELP1O95163 1332 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 TNKSO95271 1327 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 RIMBP2O15034 1052 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 SEMA3EO15041 775 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 DCP1AQ9NPI6 582 aaPredicted RBP16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 POLLQ9UGP5 575 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 PDIA4P13667 645 aaKnown RBP16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 NTRK3Q16288 839 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 SGMS1Q86VZ5 419 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
CARMIL3-203ENST00000560349 ME1P48163 572 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 A0A087WWV3 80 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 ERICH2A1L162 156 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 RBM17Q96I25 401 aaKnown RBP16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 MCM9Q9NXL9 1143 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 LEMD3Q9Y2U8 911 aa16.41■□□□□ 0.22
CARMIL3-203ENST00000560349 LIFRP42702 1097 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 SART3Q15020 963 aaKnown RBP16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 GOLPH3LQ9H4A5 285 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 KRT40Q6A162 431 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 ZNF654Q8IZM8 581 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 ESR2Q92731 530 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 CRNKL1Q9BZJ0 848 aaKnown RBP16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 TIAM2Q8IVF5 1701 aa16.4■□□□□ 0.22
CARMIL3-203ENST00000560349 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 KIF23Q02241 960 aaPredicted RBP16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 BRIP1Q9BX63 1249 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 KCNJ14Q9UNX9 436 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 MMP10P09238 476 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 PDE4CQ08493 712 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 RTN1Q16799 776 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
CARMIL3-203ENST00000560349 F8W031 263 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms