RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 TNRC18O15417 2968 aaPredicted RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 ERICH2A1L162 156 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 BTDP43251 543 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 AOC3Q16853 763 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
CRTC3-209ENST00000560320 STRIP1Q5VSL9 837 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 USP17L1Q7RTZ2 530 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 TBC1D10CQ8IV04 446 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
CRTC3-209ENST00000560320 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
CRTC3-209ENST00000560320 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
CRTC3-209ENST00000560320 TTF2Q9UNY4 1162 aaKnown RBP12.51□□□□□ -0.41
CRTC3-209ENST00000560320 GPR75-ASB3A0A0A6YYF3 556 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
CRTC3-209ENST00000560320 KCNA3P22001 575 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 DDIT3P35638 169 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 NT5C2P49902 561 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 ME3Q16798 604 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 SBK1Q52WX2 424 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 RRP12Q5JTH9 1297 aaKnown RBP12.5□□□□□ -0.41
CRTC3-209ENST00000560320 TEX11Q8IYF3 940 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 ESR2Q92731 530 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 TEKT1Q969V4 418 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 GBP4Q96PP9 640 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 LRRC2Q9BYS8 371 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
CRTC3-209ENST00000560320 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 MYH8P13535 1937 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 SCN9AQ15858 1988 aa12.5□□□□□ -0.41
CRTC3-209ENST00000560320 GAKO14976 1311 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 B4E1Z4 1266 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 USP17L12C9JPN9 530 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 USP17L21D6R901 530 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 F8W031 263 aaPredicted RBP12.49□□□□□ -0.41
CRTC3-209ENST00000560320 MLLT1Q03111 559 aaPredicted RBP12.49□□□□□ -0.41
CRTC3-209ENST00000560320 PDE4BQ07343 736 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 STK3Q13188 491 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 GRIK5Q16478 980 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 CTR9Q6PD62 1173 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 SH3RF3Q8TEJ3 882 aaPredicted RBP12.49□□□□□ -0.41
CRTC3-209ENST00000560320 ZNF274Q96GC6 653 aaPredicted RBP12.49□□□□□ -0.41
CRTC3-209ENST00000560320 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 AGXT2Q9BYV1 514 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 NBPF3Q9H094 633 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 KIF3AQ9Y496 699 aa12.49□□□□□ -0.41
CRTC3-209ENST00000560320 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 SNED1Q8TER0 1413 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 NEDD4P46934 1319 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 MYO3BQ8WXR4 1341 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 IFIT3O14879 490 aaKnown RBP12.48□□□□□ -0.41
CRTC3-209ENST00000560320 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
CRTC3-209ENST00000560320 KDM4AO75164 1064 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 LARGE1O95461 756 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 POLR3DP05423 398 aaPredicted RBP12.48□□□□□ -0.41
CRTC3-209ENST00000560320 PDCP20941 246 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 HHIPL2Q6UWX4 724 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 NECAB1Q8N987 351 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 UBAC1Q9BSL1 405 aa12.48□□□□□ -0.41
CRTC3-209ENST00000560320 ANGEL1Q9UNK9 670 aaKnown RBP12.48□□□□□ -0.41
CRTC3-209ENST00000560320 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
CRTC3-209ENST00000560320 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
CRTC3-209ENST00000560320 KLF18A0A0U1RQI7 1052 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 GOLGA6L22H0YM25 854 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 PFKFB2O60825 505 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 PTMSP20962 102 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 HDLBPQ00341 1268 aaKnown RBP12.47□□□□□ -0.41
CRTC3-209ENST00000560320 NBR1Q14596 966 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 DACT2Q5SW24 774 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 CPLX2Q6PUV4 134 aaKnown RBP12.47□□□□□ -0.41
CRTC3-209ENST00000560320 IQCA1Q86XH1 822 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 TGFBRAP1Q8WUH2 860 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
CRTC3-209ENST00000560320 MRIQ9BWK5 157 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 DAGLAQ9Y4D2 1042 aa12.47□□□□□ -0.41
CRTC3-209ENST00000560320 SH2B2O14492 632 aaPredicted RBP12.46□□□□□ -0.41
CRTC3-209ENST00000560320 GJB2P29033 226 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms