RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, human

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ETFA-212	ENST00000560179	F13A1	P00488	732 aa		11.78	□□□□□ -0.52
ETFA-212	ENST00000560179	RAD51AP2	Q09MP3	1159 aa		11.78	□□□□□ -0.52
ETFA-212	ENST00000560179	INPP5A	Q14642	412 aa		11.78	□□□□□ -0.52
ETFA-212	ENST00000560179	DYM	Q7RTS9	669 aa		11.78	□□□□□ -0.52
ETFA-212	ENST00000560179	ZNF654	Q8IZM8	581 aa		11.78	□□□□□ -0.52
ETFA-212	ENST00000560179	FAM221A	A4D161	298 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	GREM1	O60565	184 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	CDK8	P49336	464 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	UVSSA	Q2YD98	709 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	ARMC10	Q8N2F6	343 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	GATAD2B	Q8WXI9	593 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	FANCD2OS	Q96PS1	177 aa		11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	GSX1	Q9H4S2	264 aa	Predicted RBP	11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.77	□□□□□ -0.53
ETFA-212	ENST00000560179	DCDC2C	A8MYV0	355 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	ERCC5	P28715	1186 aa	Predicted RBP	11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	LRFN4	Q6PJG9	635 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	TP53INP1	Q96A56	240 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	SPON2	Q9BUD6	331 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	DISC1	Q9NRI5	854 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	CSAD	Q9Y600	493 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	ACTL7B	Q9Y614	415 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	SNCAIP	Q9Y6H5	919 aa		11.76	□□□□□ -0.53
ETFA-212	ENST00000560179	GAS2	O43903	313 aa	Known RBP	11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	CILP	O75339	1184 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	PROC	P04070	461 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	ERVK-24	P63145	666 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	FAM196A	Q6ZSG2	479 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	C12orf40	Q86WS4	652 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	UTP4	Q969X6	686 aa	Known RBP	11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	PLPPR2	Q96GM1	343 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	MYRFL	Q96LU7	910 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	SPOCK3	Q9BQ16	436 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	TGIF2	Q9GZN2	237 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	ATXN3L	Q9H3M9	355 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	TPSG1	Q9NRR2	321 aa		11.75	□□□□□ -0.53
ETFA-212	ENST00000560179	MSTN	O14793	375 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	ASPA	P45381	313 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	USP11	P51784	963 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	RPL6	Q02878	288 aa	Known RBP	11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	RING1	Q06587	406 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	DIEXF	Q68CQ4	756 aa	Known RBP	11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	GPAT2	Q6NUI2	795 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	HDX	Q7Z353	690 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	KIAA0825	Q8IV33	1275 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	ELMO3	Q96BJ8	720 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	FAM105A	Q9NUU6	356 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	HIF3A	Q9Y2N7	669 aa		11.74	□□□□□ -0.53
ETFA-212	ENST00000560179	GFRA2	O00451	464 aa		11.73	□□□□□ -0.53
ETFA-212	ENST00000560179	BMP3	P12645	472 aa		11.73	□□□□□ -0.53
ETFA-212	ENST00000560179	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.73	□□□□□ -0.53
ETFA-212	ENST00000560179	CYFIP1	Q7L576	1253 aa		11.73	□□□□□ -0.53
ETFA-212	ENST00000560179	ROBO2	Q9HCK4	1378 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	DOC2B	Q14184	412 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	SGO2	Q562F6	1265 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	PPM1J	Q5JR12	505 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	CDPF1	Q6NVV7	123 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	FAM20C	Q8IXL6	584 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	FBXO27	Q8NI29	283 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	EAF1	Q96JC9	268 aa	Predicted RBP	11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	NT5C1A	Q9BXI3	368 aa		11.72	□□□□□ -0.53
ETFA-212	ENST00000560179	BPNT1	O95861	308 aa		11.71	□□□□□ -0.53
ETFA-212	ENST00000560179	MPP2	Q14168	576 aa		11.71	□□□□□ -0.53
ETFA-212	ENST00000560179	TTLL4	Q14679	1199 aa		11.71	□□□□□ -0.53
ETFA-212	ENST00000560179	RNF214	Q8ND24	703 aa		11.71	□□□□□ -0.53
ETFA-212	ENST00000560179	ACBD3	Q9H3P7	528 aa		11.71	□□□□□ -0.53
ETFA-212	ENST00000560179	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.7	□□□□□ -0.54
ETFA-212	ENST00000560179	DHX15	O43143	795 aa	Known RBP	11.7	□□□□□ -0.54
ETFA-212	ENST00000560179	IGHA1	P01876	353 aa		11.7	□□□□□ -0.54
ETFA-212	ENST00000560179	FBLIM1	Q8WUP2	373 aa		11.7	□□□□□ -0.54
ETFA-212	ENST00000560179	ACSS3	Q9H6R3	686 aa		11.7	□□□□□ -0.54
ETFA-212	ENST00000560179	UBP1	Q9NZI7	540 aa		11.7	□□□□□ -0.54
ETFA-212	ENST00000560179	TLR3	O15455	904 aa	Known RBP	11.69	□□□□□ -0.54
ETFA-212	ENST00000560179	CRK	P46108	304 aa		11.69	□□□□□ -0.54
ETFA-212	ENST00000560179	LRRC3	Q9BY71	257 aa		11.69	□□□□□ -0.54
ETFA-212	ENST00000560179	CCSER2	Q9H7U1	834 aa		11.69	□□□□□ -0.54
ETFA-212	ENST00000560179	PIDD1	Q9HB75	910 aa		11.69	□□□□□ -0.54
ETFA-212	ENST00000560179	PICK1	Q9NRD5	415 aa		11.69	□□□□□ -0.54
ETFA-212	ENST00000560179	PRAMEF27	A3QJZ7	478 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	FANCG	O15287	622 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	NEFM	P07197	916 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	HCLS1	P14317	486 aa	Predicted RBP	11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	MAP4	P27816	1152 aa	Known RBP	11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	PAK2	Q13177	524 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	ZBTB37	Q5TC79	503 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	EZH1	Q92800	747 aa	Predicted RBP	11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	YIPF2	Q9BWQ6	316 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	KCNF1	Q9H3M0	494 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	TACC3	Q9Y6A5	838 aa		11.68	□□□□□ -0.54
ETFA-212	ENST00000560179	RNGTT	O60942	597 aa	Known RBP	11.67	□□□□□ -0.54
ETFA-212	ENST00000560179	RAB6A	P20340	208 aa		11.67	□□□□□ -0.54
ETFA-212	ENST00000560179	RXRB	P28702	533 aa		11.67	□□□□□ -0.54
ETFA-212	ENST00000560179	NTF4	P34130	210 aa		11.67	□□□□□ -0.54
ETFA-212	ENST00000560179	PRR23C	Q6ZRP0	262 aa		11.67	□□□□□ -0.54
ETFA-212	ENST00000560179	REC114	Q7Z4M0	266 aa		11.67	□□□□□ -0.54
ETFA-212	ENST00000560179	NFIC	P08651	508 aa		11.66	□□□□□ -0.54
ETFA-212	ENST00000560179	APOBR	Q0VD83	1088 aa		11.66	□□□□□ -0.54
ETFA-212	ENST00000560179	CWF19L2	Q2TBE0	894 aa	Known RBP	11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms