RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 DDX4Q9NQI0 724 aaKnown RBP13.84□□□□□ -0.19
HERC1-204ENST00000559715 CEP126Q9P2H0 1117 aa13.84□□□□□ -0.19
HERC1-204ENST00000559715 NOB1Q9ULX3 412 aaKnown RBP13.84□□□□□ -0.19
HERC1-204ENST00000559715 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
HERC1-204ENST00000559715 DDTLA6NHG4 134 aaPredicted RBP13.83□□□□□ -0.2
HERC1-204ENST00000559715 CXCL11O14625 94 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 SEMA3EO15041 775 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
HERC1-204ENST00000559715 CYP2C8P10632 490 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 IL15P40933 162 aaPredicted RBP13.83□□□□□ -0.2
HERC1-204ENST00000559715 PSMC4P43686 418 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 RGS3P49796 1198 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 PRMT2P55345 433 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 TIMM10P62072 90 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 RASGRF1Q13972 1273 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 PDS5AQ29RF7 1337 aaKnown RBP13.83□□□□□ -0.2
HERC1-204ENST00000559715 SIPA1L1O43166 1804 aa13.83□□□□□ -0.2
HERC1-204ENST00000559715 MYO5AQ9Y4I1 1855 aaKnown RBP13.82□□□□□ -0.2
HERC1-204ENST00000559715 A0A0G2JLL6 359 aaPredicted RBP13.82□□□□□ -0.2
HERC1-204ENST00000559715 H0YGN5 161 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 ENTPD3O75355 529 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
HERC1-204ENST00000559715 UBTFL1P0CB47 393 aaPredicted RBP13.82□□□□□ -0.2
HERC1-204ENST00000559715 PTPRAP18433 802 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 RHBDL3P58872 404 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 PRRT2Q7Z6L0 340 aaPredicted RBP13.82□□□□□ -0.2
HERC1-204ENST00000559715 DENND2AQ9ULE3 1009 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 ATAD5Q96QE3 1844 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
HERC1-204ENST00000559715 MTX1Q13505 466 aa13.81□□□□□ -0.2
HERC1-204ENST00000559715 KIF22Q14807 665 aa13.81□□□□□ -0.2
HERC1-204ENST00000559715 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.81□□□□□ -0.2
HERC1-204ENST00000559715 GABRQQ9UN88 632 aa13.81□□□□□ -0.2
HERC1-204ENST00000559715 ZHX2Q9Y6X8 837 aa13.81□□□□□ -0.2
HERC1-204ENST00000559715 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
HERC1-204ENST00000559715 GRK4P32298 578 aa13.8□□□□□ -0.2
HERC1-204ENST00000559715 PRKCZQ05513 592 aa13.8□□□□□ -0.2
HERC1-204ENST00000559715 SCYL3Q8IZE3 742 aa13.8□□□□□ -0.2
HERC1-204ENST00000559715 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
HERC1-204ENST00000559715 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
HERC1-204ENST00000559715 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
HERC1-204ENST00000559715 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 GPR75-ASB3A0A0A6YYF3 556 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 GJB1P08034 283 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 GJA8P48165 433 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
HERC1-204ENST00000559715 TFCP2Q12800 502 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 RRP1BQ14684 758 aaKnown RBP13.79□□□□□ -0.2
HERC1-204ENST00000559715 CCDC84Q86UT8 332 aaPredicted RBP13.79□□□□□ -0.2
HERC1-204ENST00000559715 XAGE2Q96GT9 111 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
HERC1-204ENST00000559715 A0A1B0GUL7 405 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
HERC1-204ENST00000559715 CCL5P13501 91 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 MECOMQ03112 1051 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 PI16Q6UXB8 463 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 FOCADQ5VW36 1801 aa13.78□□□□□ -0.2
HERC1-204ENST00000559715 MROH7-TTC4A0A0A0MT08 1334 aa13.77□□□□□ -0.21
HERC1-204ENST00000559715 TBC1D12O60347 775 aa13.77□□□□□ -0.21
HERC1-204ENST00000559715 CTNND1O60716 968 aaKnown RBP13.77□□□□□ -0.21
HERC1-204ENST00000559715 BTDP43251 543 aa13.77□□□□□ -0.21
HERC1-204ENST00000559715 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
HERC1-204ENST00000559715 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
HERC1-204ENST00000559715 API5Q9BZZ5 524 aaKnown RBP13.77□□□□□ -0.21
HERC1-204ENST00000559715 SLC45A1Q9Y2W3 748 aa13.77□□□□□ -0.21
HERC1-204ENST00000559715 FAM196BA6NMK8 535 aa13.76□□□□□ -0.21
HERC1-204ENST00000559715 TREML2Q5T2D2 321 aa13.76□□□□□ -0.21
HERC1-204ENST00000559715 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
HERC1-204ENST00000559715 FASTKD5Q7L8L6 764 aaKnown RBP13.76□□□□□ -0.21
HERC1-204ENST00000559715 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
HERC1-204ENST00000559715 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
HERC1-204ENST00000559715 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
HERC1-204ENST00000559715 UNC93B1Q9H1C4 597 aa13.76□□□□□ -0.21
HERC1-204ENST00000559715 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
HERC1-204ENST00000559715 COL2A1P02458 1487 aaPredicted RBP13.75□□□□□ -0.21
HERC1-204ENST00000559715 SRGAP3O43295 1099 aa13.75□□□□□ -0.21
HERC1-204ENST00000559715 HOXD10P28358 340 aa13.75□□□□□ -0.21
HERC1-204ENST00000559715 FLT3LGP49771 235 aa13.75□□□□□ -0.21
HERC1-204ENST00000559715 FCGRTP55899 365 aa13.75□□□□□ -0.21
HERC1-204ENST00000559715 JAG1P78504 1218 aa13.75□□□□□ -0.21
HERC1-204ENST00000559715 CUL9Q8IWT3 2517 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 ELNP15502 786 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 ARID4AP29374 1257 aaPredicted RBP13.74□□□□□ -0.21
HERC1-204ENST00000559715 MCAMP43121 646 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 PICALMQ13492 652 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 IRF5Q13568 498 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 DZIP1Q86YF9 867 aaKnown RBP13.74□□□□□ -0.21
HERC1-204ENST00000559715 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
HERC1-204ENST00000559715 RNF208Q9H0X6 261 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 PICK1Q9NRD5 415 aa13.74□□□□□ -0.21
HERC1-204ENST00000559715 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
HERC1-204ENST00000559715 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms