RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ANGEL1Q9UNK9 670 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 CEP57L1Q8IYX8 460 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 RRP36Q96EU6 259 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 TMEM87BQ96K49 555 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 RAB34Q9BZG1 259 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 USP17L3A6NCW0 530 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 USP17L4A6NCW7 530 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 PPARAQ07869 468 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 USP17L1Q7RTZ2 530 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 FILIP1Q7Z7B0 1213 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 RPS6KB1P23443 525 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 ZNF277Q9NRM2 450 aaPredicted RBP12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 DTNBO60941 627 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 EPS15P42566 896 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 TMEM266Q2M3C6 531 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 NUP62CLQ9H1M0 184 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 IBSPP21815 317 aaPredicted RBP12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 NOLC1Q14978 699 aaKnown RBP eCLIP12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 CD209Q9NNX6 404 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 SAMM50Q9Y512 469 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 SLC1A4P43007 532 aa12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 NCOA5Q9HCD5 579 aaKnown RBP12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 ARPP21Q9UBL0 812 aaPredicted RBP12.22□□□□□ -0.45
CARMIL3-202ENST00000559694 E7EWF7 191 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 SMC2O95347 1197 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 TMOD4Q9NZQ9 345 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 PTPDC1A2A3K4 754 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 AOC3Q16853 763 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 PDILTQ8N807 584 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 C16orf45Q96MC5 204 aaPredicted RBP12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 CWC15Q9P013 229 aaKnown RBP12.21□□□□□ -0.45
CARMIL3-202ENST00000559694 UBA7P41226 1012 aa12.21□□□□□ -0.46
CARMIL3-202ENST00000559694 CAMK4Q16566 473 aa12.21□□□□□ -0.46
CARMIL3-202ENST00000559694 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.46
CARMIL3-202ENST00000559694 CEP89Q96ST8 783 aa12.21□□□□□ -0.46
CARMIL3-202ENST00000559694 TANGO6Q9C0B7 1094 aa12.21□□□□□ -0.46
CARMIL3-202ENST00000559694 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.46
CARMIL3-202ENST00000559694 MCAMP43121 646 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 NOM1Q5C9Z4 860 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 TTC12Q9H892 705 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PDE4CQ08493 712 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 STIM1Q13586 685 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 ZMYM1Q5SVZ6 1142 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 C6orf50Q9HD87 102 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 TCP11L1Q9NUJ3 509 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 CSADQ9Y600 493 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PPP1R12BO60237 982 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 IPO7O95373 1038 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 NTSR2O95665 410 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 GYS1P13807 737 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PRDX5P30044 214 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 HSPA4P34932 840 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 GPSM2P81274 684 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 HSP90B2PQ58FF3 399 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PODNQ7Z5L7 613 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PIH1D3Q9NQM4 214 aaKnown RBP12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PRKAB2O43741 272 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 SP8Q8IXZ3 490 aa12.2□□□□□ -0.46
CARMIL3-202ENST00000559694 PXDNQ92626 1479 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 ADD2P35612 726 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 WWC2Q6AWC2 1192 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 OSBP2Q969R2 916 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 ATP8A2Q9NTI2 1148 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 TNNT1P13805 278 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 MECOMQ03112 1051 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 CSRNP1Q96S65 589 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 PUS7LQ9H0K6 701 aaKnown RBP12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 CALML3P27482 149 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 DCAF15Q66K64 600 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 CCDC125Q86Z20 511 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
CARMIL3-202ENST00000559694 IGSF3O75054 1194 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms