RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 VPS37DQ86XT2 251 aa11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 TSR2Q969E8 191 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 FAM84BQ96KN1 310 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 GUCD1Q96NT3 240 aa11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 KCNH4Q9UQ05 1017 aa11.38□□□□□ -0.59
SNRPA1-208ENST00000559686 TRIM32Q13049 653 aa11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 FKBP5Q13451 457 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 FAM83AQ86UY5 434 aa11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 DNAAF4Q8WXU2 420 aa11.37□□□□□ -0.59
SNRPA1-208ENST00000559686 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 APOBEC3HQ6NTF7 200 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 ANKRD13CQ8N6S4 541 aa11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 ZDHHC15Q96MV8 337 aa11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 PUS3Q9BZE2 481 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 C11orf49Q9H6J7 331 aa11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 DNAH12Q6ZR08 3092 aa11.36□□□□□ -0.59
SNRPA1-208ENST00000559686 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 FLIIQ13045 1269 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 IRF5Q13568 498 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 RALBP1Q15311 655 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 LINS1Q8NG48 757 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 COA7Q96BR5 231 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 RAPGEFL1Q9UHV5 662 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 ZHX2Q9Y6X8 837 aa11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-208ENST00000559686 F6X3S4 739 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 COL9A1P20849 921 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 FAM151AQ8WW52 585 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 PICK1Q9NRD5 415 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 ZNF112Q9UJU3 913 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 DOCK3Q8IZD9 2030 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 DOCK2Q92608 1830 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 PFASO15067 1338 aa11.34□□□□□ -0.59
SNRPA1-208ENST00000559686 MYH13Q9UKX3 1938 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 RPAP1Q9BWH6 1393 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 A0A0G2JLL6 359 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 TRIM75PA6NK02 468 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 CXCL11O14625 94 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 HMGCRP04035 888 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 SLURP2P0DP57 97 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 NFIAQ12857 509 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 FKBP1CQ5VVH2 108 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 PRRT2Q7Z6L0 340 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 MAFAQ8NHW3 353 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 TBC1D22AQ8WUA7 517 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 PTPRFP10586 1907 aa11.33□□□□□ -0.6
SNRPA1-208ENST00000559686 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 CAPN2P17655 700 aa11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 CAVIN4Q5BKX8 364 aa11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 NOL9Q5SY16 702 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 ZNF697Q5TEC3 545 aa11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 FBXO33Q7Z6M2 555 aa11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 MAST3O60307 1309 aa11.32□□□□□ -0.6
SNRPA1-208ENST00000559686 C7P10643 843 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 CYP2B6P20813 491 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 DIXDC1Q155Q3 683 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 CDC42EP5Q6NZY7 148 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 SCYL3Q8IZE3 742 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 CDX2Q99626 313 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 LBHD1Q9BQE6 289 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 DOCK1Q14185 1865 aa11.31□□□□□ -0.6
SNRPA1-208ENST00000559686 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 PHIPQ8WWQ0 1821 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 PTPRAP18433 802 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 AFG3L2Q9Y4W6 797 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 LRRFIP2Q9Y608 721 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 CDH23Q9H251 3354 aa11.3□□□□□ -0.6
SNRPA1-208ENST00000559686 PHF20L1A8MW92 1017 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms